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Updated: Jun 25, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Genetic variation and evolution of the pathogenicity island of Enterococcus faecalis
Shonna M McBride1, Phillip S Coburn, Arto S Baghdayan
1Schepens Eye Research Institute, Department of Ophthalmology, Harvard Medical School, 20 Staniford Street, Boston, MA 02114, USA.
Abstract:
Enterococcus faecalis is a leading cause of nosocomial infections and is known for its ability to acquire and transfer virulence and antibiotic resistance determinants from other organisms. A 150-kb pathogenicity island (PAI) encoding several genes that contribute to pathogenesis was identified among antibiotic-resistant clinical isolates. In the current study, we examined the structure of the PAI in a collection of isolates from diverse sources in order to gain insight into its genesis and dynamics. Using multilocus sequence typing to assess relatedness at the level of strain background and microarray analysis to identify variations in the PAI, we determined the extent to which structural variations occur within the PAI and also the extent to which these variations occur independently of the chromosome. Our findings provide evidence for a modular gain of defined gene clusters by the PAI. These results support horizontal transfer as the mechanism for accretion of genes into the PAI and highlight a likely role for mobile elements in the evolution of the E. faecalis PAI.
Insights
The Enterococcus faecalis pathogenicity island (PAI) evolves through modular gene gain via horizontal transfer. Mobile elements likely drive the PAI
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Enterococcus faecalis is a major cause of hospital-acquired infections.
- This bacterium readily acquires virulence and antibiotic resistance genes.
- A 150-kb pathogenicity island (PAI) contributes to E. faecalis pathogenesis.
Purpose of the Study:
- To investigate the structural variations within the E. faecalis PAI.
- To understand the genesis and dynamics of PAI evolution.
- To determine the role of horizontal gene transfer in PAI development.
Main Methods:
- Multilocus sequence typing (MLST) to analyze strain background relatedness.
- Microarray analysis to detect variations within the PAI.
- Comparative analysis of PAI variations across diverse E. faecalis isolates.
Main Results:
- Evidence of modular gain of gene clusters within the PAI was observed.
- PAI structural variations occurred independently of chromosomal background.
- Horizontal transfer is supported as the primary mechanism for PAI gene accretion.
Conclusions:
- The E. faecalis PAI exhibits modular evolution through the acquisition of gene clusters.
- Horizontal gene transfer is a key driver for PAI expansion and evolution.
- Mobile genetic elements likely play a significant role in shaping the E. faecalis PAI.
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