Sophisticated framework between cell cycle arrest and apoptosis induction based on p53 dynamics

Hiroyuki Hamada1, Yoshihiko Tashima, Yu Kisaka

  • 1Laboratory for Bioinformatics, Graduate School of Systems Life Sciences, Kyushu University, Fukuoka, Japan.

Plos One
|March 11, 2009
PubMed

Insights

The tumor suppressor p53

Area of Science:

  • Cellular Biology
  • Biophysics
  • Systems Biology

Background:

  • The tumor suppressor p53 plays a critical role in regulating DNA repair, cell cycle arrest, and apoptosis.
  • The precise mechanisms by which p53 controls cell cycle arrest and apoptosis induction remain incompletely understood.
  • Understanding p53's regulatory role is crucial for comprehending cell fate determination and preventing malignant transformations.

Purpose of the Study:

  • To develop a novel kinetic mathematical model to investigate the influence of DNA damage on p53-mediated G2/M cell cycle arrest and intrinsic apoptosis.
  • To elucidate how DNA damage levels modulate p53 synthesis and its downstream effects on cell cycle progression and apoptosis.
  • To identify the conditions under which p53 oscillation dynamics trigger apoptosis induction.

Main Methods:

  • Construction of a novel kinetic mathematical model integrating established models to describe p53 synthesis regulation by DNA damage.
  • The model incorporates 32 dependent variables and 115 kinetic parameters to simulate cellular responses.
  • Analysis of model outputs to examine the impact of varying DNA damage levels on G2/M arrest and apoptosis.

Main Results:

  • Low DNA damage leads to a slight, sigmoidal increase in p53 synthesis over time.
  • High DNA damage induces oscillatory behavior in p53 levels.
  • Apoptosis is triggered only by severe DNA damage causing p53 oscillations and requires extreme p53 activation after G2/M arrest release.

Conclusions:

  • p53 oscillation dynamics are critical for inducing apoptosis, suggesting a key role in safeguarding against malignant transformations.
  • The cell cycle arrest system and apoptosis induction system, regulated by p53, determine cell fate.
  • This model provides a framework for understanding the dominant factors governing cell cycle arrest and apoptosis.

Related Concept Videos

DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
Negative Regulator Molecules01:23

Negative Regulator Molecules

Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
Abnormal Proliferation02:23

Abnormal Proliferation

Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the daughter...
The Intrinsic Apoptotic Pathway01:31

The Intrinsic Apoptotic Pathway

Internal cellular stress, such as cellular injury or hypoxia, triggers intrinsic apoptosis. The B-cell lymphoma 2 (Bcl-2) family of proteins are the primary regulators of the intrinsic apoptotic pathway. For example, during DNA damage, checkpoint proteins, such as Ataxia Telangiectasia Mutated (ATM protein) and Checkpoints Factor-2 (Chk2) proteins, are activated. These proteins phosphorylate p53 which further activates pro-apoptotic proteins, such as Bax, Bak, PUMA, and Noxa, and inhibits...
Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...