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Published on: March 7, 2025
Structural basis for the antiproliferative activity of the Tob-hCaf1 complex
Masataka Horiuchi1, Kosei Takeuchi, Nobuo Noda
1Department of Structural Biology, Graduate School of Pharmaceutical Sciences, Hokkaido University, Sapporo, Japan.
Abstract:
The Tob/BTG family is a group of antiproliferative proteins containing two highly homologous regions, Box A and Box B. These proteins all associate with CCR4-associated factor 1 (Caf1), which belongs to the ribonuclease D (RNase D) family of deadenylases and is a component of the CCR4-Not deadenylase complex. Here we determined the crystal structure of the complex of the N-terminal region of Tob and human Caf1 (hCaf1). Tob exhibited a novel fold, whereas hCaf1 most closely resembled the catalytic domain of yeast Pop2 and human poly(A)-specific ribonuclease. Interestingly, the association of hCaf1 was mediated by both Box A and Box B of Tob. Cell growth assays using both wild-type and mutant proteins revealed that deadenylase activity of Caf1 is not critical but complex formation is crucial to cell growth inhibition. Caf1 tethers Tob to the CCR4-Not deadenylase complex, and thereby Tob gathers several factors at its C-terminal region, such as poly(A)-binding proteins, to exert antiproliferative activity.
Insights
The Tob protein complex with human Caf1 (hCaf1) inhibits cell growth. Complex formation, not deadenylase activity, is key for Tob/hCaf1
Area of Science:
- Molecular Biology
- Structural Biology
- Cell Biology
Background:
- Tob/BTG proteins are antiproliferative factors.
- They interact with CCR4-associated factor 1 (Caf1), a deadenylase component of the CCR4-Not complex.
Purpose of the Study:
- Determine the crystal structure of the Tob N-terminal region complexed with human Caf1 (hCaf1).
- Investigate the role of Caf1's deadenylase activity versus complex formation in Tob-mediated cell growth inhibition.
Main Methods:
- X-ray crystallography to determine the structure of the Tob-hCaf1 complex.
- Cell growth assays using wild-type and mutant proteins.
Main Results:
- The crystal structure revealed a novel fold for Tob and similarity of hCaf1 to known catalytic domains.
- hCaf1 association with Tob is mediated by both Box A and Box B regions.
- Cell growth inhibition by Tob/hCaf1 depends on complex formation, not Caf1's deadenylase activity.
Conclusions:
- Caf1 acts as a tether, bringing Tob to the CCR4-Not complex.
- Tob, via its C-terminal region, recruits factors like poly(A)-binding proteins to inhibit cell proliferation.
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