Structure of dystrophia myotonica protein kinase

Jonathan M Elkins1, Ann Amos, Frank H Niesen

  • 1Structural Genomics Consortium, Nuffield Department of Medicine, Oxford University, Old Road Campus Research Building, Oxford, OX3 7DQ, United Kingdom.

Insights

Dystrophia myotonica protein kinase (DMPK) forms dimers through its coiled-coil domains, not just the kinase domain. The crystal structure reveals BIM-8 inhibitor binding in an active kinase conformation.

Area of Science:

  • Biochemistry
  • Structural Biology
  • Molecular Biology

Background:

  • Dystrophia myotonica protein kinase (DMPK) is a serine/threonine kinase with kinase and coiled-coil domains.
  • DMPK is implicated in cellular processes through its multimerization capabilities.

Purpose of the Study:

  • To elucidate the structural basis of DMPK dimerization and its active conformation.
  • To understand the binding interaction of the inhibitor bisindolylmaleimide VIII (BIM-8) with DMPK.

Main Methods:

  • X-ray crystallography was used to determine the structure of the DMPK kinase domain bound to BIM-8.
  • Comparative structural analysis was performed with related kinases like Rho-associated kinases.

Main Results:

  • The crystal structure revealed a dimeric DMPK kinase domain associated via a conserved dimerization domain.
  • The kinase domain adopts an active conformation, with key catalytic residues properly positioned.
  • The inhibitor BIM-8 binds to the ATP site, showing a similar mode to PDK1.
  • Stable in vivo dimer formation likely requires the coiled-coil domains, not solely the kinase domain.

Conclusions:

  • The kinase domain alone is insufficient for stable DMPK dimerization in vivo.
  • The coiled-coil domains are essential for the stable formation of DMPK dimers.
  • The structural insights provide a basis for understanding DMPK function and inhibitor design.

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