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Updated: Jun 24, 2026

Analyzing and Building Nucleic Acid Structures with 3DNA
Published on: April 26, 2013
Relative orientation of rigid nitroxides by PELDOR: beyond distance measurements in nucleic acids
Olav Schiemann1, Pavol Cekan, Dominik Margraf
1Centre for Biomolecular Sciences, University of St. Andrews, North Haugh, St Andrews KY 1619ST, UK. os11@st-andrews.ac.uk
Abstract:
Show me your angle: Incorporation of the rigid spin label C allows determination of both distance and orientation of two nitroxide spin labels in DNA by PELDOR experiments at common X-band frequencies. The orientational information is obtained by varying the position of the detection pulses over the nitroxide spectrum. Simulation of the set of time traces yields very precise distances and angles.
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