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Updated: Jun 24, 2026

Internalization and Observation of Fluorescent Biomolecules in Living Microorganisms via Electroporation
Published on: February 8, 2015
Fluorescent proteins for single-molecule fluorescence applications
Britta Seefeldt1, Robert Kasper, Thorsten Seidel
1Applied Laser Physics and Laser Spectroscopy, University of Bielefeld, Physics Department, Universitätsstrasse 25, 33615 Bielefeld, Germany.
Abstract:
We present single-molecule fluorescence data of fluorescent proteins GFP, YFP, DsRed, and mCherry, a new derivative of DsRed. Ensemble and single-molecule fluorescence experiments proved mCherry as an ideally suited fluorophore for single-molecule applications, demonstrated by high photostability and rare fluorescence-intensity fluctuations. Although mCherry exhibits the lowest fluorescence quantum yield among the fluorescent proteins investigated, its superior photophysical characteristics suggest mCherry as an ideal alternative in single-molecule fluorescence experiments. Due to its spectral characteristics and short fluorescence lifetime of 1.46 ns, mCherry complements other existing fluorescent proteins and is recommended for tracking and localization of target molecules with high accuracy, fluorescence resonance energy transfer (FRET), fluorescence lifetime imaging microscopy (FLIM), or multicolor applications.
Insights
mCherry fluorescent protein is ideal for single-molecule studies due to its photostability and minimal intensity fluctuations, making it a valuable tool for advanced microscopy techniques.
Area of Science:
- Biophysics
- Molecular Biology
- Microscopy
Background:
- Fluorescent proteins are crucial tools in biological research.
- Existing fluorescent proteins have limitations for advanced single-molecule applications.
Purpose of the Study:
- To evaluate mCherry, a DsRed derivative, as a fluorophore for single-molecule fluorescence experiments.
- To compare mCherry's photophysical properties with other common fluorescent proteins.
Main Methods:
- Single-molecule fluorescence spectroscopy.
- Ensemble fluorescence measurements.
- Photostability and fluorescence intensity fluctuation analysis.
Main Results:
- mCherry demonstrated high photostability and rare fluorescence-intensity fluctuations.
- Despite lower quantum yield, mCherry's superior photophysics make it suitable for single-molecule applications.
- mCherry has a fluorescence lifetime of 1.46 ns.
Conclusions:
- mCherry is an excellent alternative for single-molecule fluorescence experiments.
- Its spectral characteristics and short lifetime enable accurate tracking, localization, FRET, FLIM, and multicolor applications.
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