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Updated: Jun 24, 2026

Peroxisome Staining in Mammalian Cells Using Peroxisome-Specific Probes
Published on: December 19, 2025
Pxmp2 is a channel-forming protein in Mammalian peroxisomal membrane
Aare Rokka1, Vasily D Antonenkov, Raija Soininen
1Department of Biochemistry, Biocenter Oulu, University of Oulu, Oulu, Finland.
Background:
Peroxisomal metabolic machinery requires a continuous flow of organic and inorganic solutes across peroxisomal membrane. Concerning small solutes, the molecular nature of their traffic has remained an enigma.
Methods/Principal Findings:
In this study, we show that disruption in mice of the Pxmp2 gene encoding Pxmp2, which belongs to a family of integral membrane proteins with unknown function, leads to partial restriction of peroxisomal membrane permeability to solutes in vitro and in vivo. Multiple-channel recording of liver peroxisomal preparations reveals that the channel-forming components with a conductance of 1.3 nS in 1.0 M KCl were lost in Pxmp2(-/-) mice. The channel-forming properties of Pxmp2 were confirmed with recombinant protein expressed in insect cells and with native Pxmp2 purified from mouse liver. The Pxmp2 channel, with an estimated diameter of 1.4 nm, shows weak cation selectivity and no voltage dependence. The long-lasting open states of the channel indicate its functional role as a protein forming a general diffusion pore in the membrane.
Conclusions/Significance:
Pxmp2 is the first peroxisomal channel identified, and its existence leads to prediction that the mammalian peroxisomal membrane is permeable to small solutes while transfer of "bulky" metabolites, e.g., cofactors (NAD/H, NADP/H, and CoA) and ATP, requires specific transporters.
Insights
Peroxisomal membrane protein 2 (Pxmp2) forms the first identified peroxisomal channel, facilitating small solute transport. Its absence restricts membrane permeability, suggesting specific transporters handle larger metabolites.
Area of Science:
- Cell Biology
- Membrane Transport
- Biophysics
Background:
- Peroxisomal metabolic processes depend on solute transport across their membranes.
- The molecular mechanisms governing small solute passage through peroxisomal membranes remain largely unknown.
Purpose of the Study:
- To investigate the function of Pxmp2, a protein family member of integral membrane proteins with previously unknown roles.
- To elucidate the role of Pxmp2 in regulating peroxisomal membrane permeability.
Main Methods:
- Gene disruption in mice to create Pxmp2 knockout models (Pxmp2-/-).
- In vitro and in vivo assessment of peroxisomal membrane permeability.
- Electrophysiological recordings (multiple-channel recording) of liver peroxisomal preparations.
- Recombinant Pxmp2 expression in insect cells and purification of native Pxmp2 from mouse liver.
Main Results:
- Pxmp2 gene disruption resulted in partial restriction of peroxisomal membrane permeability.
- Loss of channel-forming components (1.3 nS conductance) in Pxmp2-/- mice.
- Pxmp2 protein reconstituted into artificial systems exhibited channel activity (1.4 nm diameter, weak cation selectivity, non-voltage-dependent, long open states).
Conclusions:
- Pxmp2 is identified as the first functional channel in the peroxisomal membrane.
- The mammalian peroxisomal membrane is permeable to small solutes via Pxmp2 channels.
- Larger metabolites like cofactors (NAD/H, NADP/H, CoA) and ATP likely require dedicated transporter proteins for peroxisomal import/export.
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