mwr Xer site-specific recombination is hypersensitive to DNA supercoiling

Sonia Trigueros1, Tung Tran, Nohemy Sorto

  • 1Bionanotechnology IRC Department of Physics, University of Oxford, Oxford OX1 3QU, UK. s.trigueros1@physics.ox.ac.uk

Nucleic Acids Research
|April 11, 2009
PubMed

Insights

Osmotic pressure affects plasmid dimer resolution by influencing DNA supercoiling. This impacts Xer recombination at the mwr site, unlike the cer site, revealing a unique regulatory mechanism for plasmid stability.

Area of Science:

  • Microbiology
  • Molecular Biology
  • Genetics

Background:

  • The multiresistance plasmid pJHCMW1, found in Klebsiella pneumoniae, contains a unique Xer recombination site named mwr.
  • Plasmid dimer resolution is crucial for maintaining genetic stability.
  • Xer recombination is a key process in resolving plasmid dimers.

Purpose of the Study:

  • To investigate the influence of environmental factors on Xer recombination efficiency at the mwr site.
  • To determine the relationship between DNA supercoiling and mwr site recombination.
  • To compare the behavior of the mwr site with other known Xer recombination sites like cer.

Main Methods:

  • Utilized reporter plasmids with directly repeated mwr or cer sites.
  • Manipulated the osmotic pressure of the growth medium to alter DNA supercoiling.
  • Quantified Holliday junctions to measure recombination efficiency.
  • Assessed Xer recombination activity under varying supercoiling densities.

Main Results:

  • Plasmid dimer resolution efficiency at the mwr site is highly dependent on the osmotic pressure of the growth medium.
  • Decreased osmotic pressure led to increased plasmid DNA supercoiling density.
  • Recombination at the mwr site significantly decreased with reduced supercoiling, unlike the cer site which remained efficient.
  • Holliday junction formation varied with supercoiling levels, correlating with recombination efficiency.

Conclusions:

  • Changes in osmotic pressure modulate DNA supercoiling, thereby affecting Xer recombination at the mwr site.
  • The mwr site exhibits a unique sensitivity to DNA supercoiling levels, distinguishing it from other Xer recombination target sites.
  • This finding provides insight into novel regulatory mechanisms controlling plasmid stability in bacteria.

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