Related Experiment Video
Updated: Jun 24, 2026

08:35
Inducible and Reversible Dominant-negative (DN) Protein Inhibition
Published on: January 7, 2019
Sqd interacts with the Drosophila retinoblastoma tumor suppressor Rbf
Joseph Ahlander1, Giovanni Bosco
1Department of Molecular and Cellular Biology, University of Arizona, Tucson, 85721, USA.
Biochemical and Biophysical Research Communications
|April 15, 2009
Summary
The retinoblastoma tumor suppressor (RB) protein interacts with the RNA-binding protein Squid (Sqd). This interaction suggests RB may have a novel role in RNA processing.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- The retinoblastoma tumor suppressor (RB) protein is crucial for cell cycle regulation, primarily through its C-terminal domain.
- The function of the amino-terminal domain of RB is less understood, with few identified binding partners.
Purpose of the Study:
- To identify novel binding partners of the RB amino-terminal domain.
- To investigate the functional relationship between RB and its newly identified partners.
Main Methods:
- Used immunoprecipitation coupled with mass spectrometry to identify binding partners of the Drosophila Rbf amino-terminal domain (RbfN).
- Confirmed protein-protein interactions using Western blot.
- Assessed protein colocalization in Drosophila salivary gland cells.
- Investigated functional interactions using double RNAi knockdown in Drosophila eyes.
Main Results:
- Identified the RNA-binding protein Squid (Sqd) as a putative interacting partner of RbfN.
- Confirmed physical interaction between Sqd and the Rbf amino-terminal domain.
- Observed colocalization of Sqd and RbfN in Drosophila salivary gland cells.
- Demonstrated that combined knockdown of Rbf and Sqd leads to significant loss of eye bristles, indicating a shared functional pathway.
Conclusions:
- Retinoblastoma tumor suppressor (RB) physically and genetically interacts with the RNA-binding protein Squid (Sqd).
- RB may play a novel role in RNA processing through its interaction with RNA-binding proteins like Sqd.
- This interaction highlights a potential new avenue for understanding RB function beyond cell cycle control.
Related Concept Videos
The Retinoblastoma Gene
Tumor suppressor genes are normal genes that can slow down cell division, repair DNA mistakes, or program the cells for apoptosis in case of irreparable damage. Hence, they play an essential role in preventing the proliferation of damaged cells.
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
The Retinoblastoma Gene
Tumor suppressor genes are normal genes that can slow down cell division, repair DNA mistakes, or program the cells for apoptosis in case of irreparable damage. Hence, they play an essential role in preventing the proliferation of damaged cells.
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
Negative Regulator Molecules
Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
Small GTPases - Ras and Rho
Ras and Rho are small monomeric GTPases that act downstream of receptor tyrosine kinase (RTK) and regulate various cellular processes. These GTPases switch between active and inactive states by binding to guanine nucleotides.
Three regulatory proteins control their activity:
Three regulatory proteins control their activity:
TGF - β Signaling Pathway
The TGF-β signaling pathway regulates cell growth, differentiation, adhesion, motility, and development. TGF-β ligands that induce TGF-β signaling are synthesized in their latent form. Several proteases or cell surface receptors such as integrins act upon the latent form, releasing the active ligand. There are three types of mammalian TGF-βs: (TGF-β1, TGF-β2, and TGF-β3) that bind as homodimers or heterodimers to TGF-β receptors. The TGF-β receptors are of three kinds RI, RII, and RIII. The RI...
Rab Proteins
Rab proteins constitute the largest family of monomeric GTPases, of which 70 members are present in humans. Rab proteins and their effectors regulate consecutive stages of vesicle transport such as vesicle transport, docking, and fusion to the correct recipient membrane.
Rab proteins switch between a cytosolic, GDP-bound inactive state and a membrane-anchored, GTP-bound active state. By themselves, Rabs show slow rates of GDP/GTP exchange and GTP hydrolysis. Thus, Rab proteins are considered...
Rab proteins switch between a cytosolic, GDP-bound inactive state and a membrane-anchored, GTP-bound active state. By themselves, Rabs show slow rates of GDP/GTP exchange and GTP hydrolysis. Thus, Rab proteins are considered...

