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Updated: Jun 23, 2026

Characterize Disease-related Mutants of RAF Family Kinases by Using a Set of Practical and Feasible Methods
Published on: July 17, 2019
Biological effects of hexitol and altritol-modified siRNAs targeting B-Raf
Michael Fisher1, Mikhail Abramov, Arthur Van Aerschot
1Department of Pharmacology, School of Medicine, University of North Carolina, Chapel Hill, NC 27599, USA.
Abstract:
Increasing the effectiveness of siRNAs through chemical modification is an important task. Here we describe altritol and hexitol modified oligonucleotides targeting the B-Raf oncogene that is critical for the growth and survival of melanoma cells. Using assays for apoptosis, DNA synthesis, colony formation and B-Raf protein and message levels, we demonstrate that certain hexitol modifications can improve the effectiveness of B-Raf siRNAs and also increase duration of action. Altritol modified siRNAs were similar to or slightly less effective than unmodified B-Raf siRNA. Modifications at the 3' or 5' end of the sense strand, at the 3' end of the antisense strand, or within either strand were well tolerated. The basis for the increased effectiveness of the hexitol-modified siRNAs is not fully understood but may be partly due to increased stability to nucleases.
Insights
Certain hexitol modifications enhance the effectiveness and duration of small interfering RNAs (siRNAs) targeting the B-Raf oncogene in melanoma. Altritol modifications showed less improvement compared to unmodified siRNAs.
Area of Science:
- Oligonucleotide chemistry
- Cancer biology
- Melanoma therapeutics
Background:
- Small interfering RNAs (siRNAs) are crucial for gene silencing.
- The B-Raf oncogene drives melanoma growth and survival.
- Chemical modifications can enhance siRNA stability and efficacy.
Purpose of the Study:
- To investigate the impact of altritol and hexitol modifications on B-Raf targeting siRNAs.
- To assess the efficacy and duration of action of modified B-Raf siRNAs in melanoma.
Main Methods:
- Synthesis of altritol and hexitol modified oligonucleotides.
- In vitro assays including apoptosis, DNA synthesis, and colony formation.
- Measurement of B-Raf protein and message levels.
Main Results:
- Hexitol-modified B-Raf siRNAs demonstrated improved effectiveness and prolonged action.
- Altritol-modified siRNAs were comparable or less effective than unmodified siRNAs.
- Modifications were well-tolerated at various positions on the siRNA strands.
Conclusions:
- Specific hexitol modifications can significantly enhance B-Raf siRNA performance in melanoma.
- Increased nuclease stability may contribute to the enhanced efficacy of hexitol-modified siRNAs.
- These findings support the development of chemically modified siRNAs for cancer therapy.
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