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Related Concept Videos

Protein Dynamics in Living Cells01:19

Protein Dynamics in Living Cells

Different fluorescence-based techniques are used to study the protein dynamics in living cells. These techniques include FRAP, FRET, and PET.
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Photoluminescence: Applications01:14

Photoluminescence: Applications

Photoluminescence offers a wide range of applications due to its inherent sensitivity and selectivity. This technique allows for both direct and indirect analyses of the analyte. Direct quantitative analysis is possible when the analyte exhibits a favorable quantum yield for fluorescence or phosphorescence. However, an indirect analysis may be feasible if the analyte is not fluorescent or phosphorescent, or if the quantum yield is unfavorable. Indirect methods include reacting the analyte with...
Labeling DNA Probes03:31

Labeling DNA Probes

DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
Western Blotting01:15

Western Blotting

Western blotting is an analytical technique for protein identification. It has various applications in immunology and medicine, including detecting diseases like bovine spongiform encephalopathy, mad cow disease, and human and feline immunodeficiency virus from biological samples.
The technique begins with separating proteins from the sample using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), followed by protein transfer, immunoblotting, and finally, protein detection.
Fluorescence and Phosphorescence: Instrumentation01:25

Fluorescence and Phosphorescence: Instrumentation

Fluorometers and spectrofluorometers are two types of instruments used for measuring molecular fluorescence. These instruments differ in how they select excitation and emission wavelengths and the type of light sources they utilize. Fluorometers use absorption interference filters to choose excitation and emission wavelengths. The excitation source in a fluorometer is typically a low-pressure mercury vapor lamp that emits intense lines distributed throughout the ultraviolet and visible regions.
Phosphorylation01:02

Phosphorylation

The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...

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Related Experiment Video

Updated: Jun 23, 2026

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
11:23

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein

Published on: June 30, 2019

Phosphoprotein detection on protein electroblot using a phosphate-specific fluorophore.

Lee Broderick Bockus1, R Hal Scofield

  • 1Oklahoma Medical Research Foundation, 825 NE 13th Street, Oklahoma City, OK, 73104, USA. lee-bockus@omrf.org

Methods in Molecular Biology (Clifton, N.J.)
|April 21, 2009
PubMed
Summary

A new fluorescent dye, Pro-Q Diamond, enables simple and reliable detection of phosphoproteins in blots. This technique offers selective phosphate group binding for accurate protein analysis.

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An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation
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Related Experiment Videos

Last Updated: Jun 23, 2026

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
11:23

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein

Published on: June 30, 2019

An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation
07:45

An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation

Published on: June 6, 2022

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Proteomics

Background:

  • Phosphoprotein phosphorylation is a critical cellular regulatory mechanism.
  • Accurate detection of phosphoproteins is essential for understanding cellular pathways.

Purpose of the Study:

  • To develop a simple and reliable fluorescent detection technique for phosphoproteins in blots.
  • To adapt the Pro-Q Diamond dye for use in protein blotting applications.

Main Methods:

  • Utilized a small-molecule organic fluorophore, Pro-Q Diamond dye, for phosphoprotein detection.
  • Employed standard electrophoresis and electroblotting onto nitrocellulose or PVDF membranes.
  • Stained blots with Pro-Q Diamond dye, followed by destaining and imaging.

Main Results:

  • The Pro-Q Diamond dye selectively binds to the phosphate moiety of phosphoproteins.
  • Non-phosphorylated proteins, DNA, and RNA were not detected, ensuring specificity.
  • The technique is compatible with various imaging devices, MALDI-TOF-MS, and Edman sequencing.

Conclusions:

  • The Pro-Q Diamond dye offers a robust and versatile method for fluorescent detection of phosphoproteins in blots.
  • This technique simplifies phosphoprotein analysis and is compatible with downstream proteomic analyses.
  • The method enhances the study of phosphorylation-dependent cellular processes.