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Related Concept Videos

Genomics02:02

Genomics

Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
Microorganisms in Medicine and Therapeutics01:29

Microorganisms in Medicine and Therapeutics

Microorganisms play a fundamental role in vaccine development, gene therapy, and therapeutic production. Their biological properties are harnessed to advance medicine and public health. Beyond immunization, microorganisms contribute to gut health, antibiotic synthesis, and genetic disease treatment.Live Attenuated and Inactivated VaccinesLive attenuated vaccines, such as the measles, mumps, and rubella (MMR) vaccine, utilize weakened forms of pathogens to closely resemble natural infections.
Human Virome01:26

Human Virome

The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible only with...
Pharmacogenomics: Identification of New Drug Targets01:29

Pharmacogenomics: Identification of New Drug Targets

Advances in genomics have profoundly influenced drug discovery by increasing both the speed and accuracy of pharmaceutical development. Pharmacogenomics, which examines how genetic variation influences drug response, facilitates the identification of novel therapeutic targets and enables patient stratification for personalized treatment. These strategies contribute to improved drug efficacy, minimized adverse effects, and more efficient clinical trial design.Mapping genetic differences...
Ribosome Profiling02:24

Ribosome Profiling

Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
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The technique helps...
Immunoprecipitation01:20

Immunoprecipitation

Immunoprecipitation, or IP, is a widely used technique that employs protein-antibody interactions to isolate proteins or protein complexes in their native state for studying protein-protein interactions, quaternary structures, or supramolecular complexes. Various modifications of the technique, including chromatin IP, cross-linking IP, and fluorescence IP, are commonly used.
Chromatin Immunoprecipitation
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Predictive Immune Modeling of Solid Tumors
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Published on: February 25, 2020

From transcriptome analysis to immunogenomics: current status and future direction.

Osamu Ohara1

  • 1Department of Human Genome Research, Kazusa DNA Research Institute, 2-6-7 Kazusa-Kamatari, Kisarazu, Chiba 292-0818, Japan. ohara@kazusa.or.jp

FEBS Letters
|April 22, 2009
PubMed
Summary

This study reviews the history and future of immunogenomics, a field combining functional genomics with immune system research. It highlights the power of functional genomic approaches for understanding the human immune system.

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Area of Science:

  • Genomics
  • Immunology
  • Bioinformatics

Background:

  • Pioneered complementary DNA (cDNA) sequencing for human protein structure prediction in 1994.
  • Subsequent cDNA sequencing projects extensively characterized the mammalian transcriptome.
  • Significant efforts were made to develop functional human genomics resources.

Purpose of the Study:

  • Demonstrate the practical application of functional genomic approaches.
  • Achieve a comprehensive understanding of the immune system through 'immunogenomics'.
  • Provide historical context and future perspectives on immunogenomics.

Main Methods:

  • Review of historical cDNA sequencing projects.
  • Application of functional genomic approaches to immunogenomics.
  • Analysis of existing functional genomics resources.

Main Results:

  • Established the foundation for large-scale cDNA sequencing and transcriptome characterization.
  • Highlighted the integration of genomics and immunology.
  • Demonstrated the utility of functional genomics in understanding complex biological systems.

Conclusions:

  • Immunogenomics offers a powerful framework for dissecting the immune system.
  • The integration of genomics and functional studies is crucial for future biological research.
  • The field is poised for significant advancements with continued development of genomic resources and methodologies.