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Related Concept Videos

Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
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Molecular Orbital Theory II

Molecular Orbital Energy Diagrams
Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
DNA Topoisomerases02:02

DNA Topoisomerases

Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types.  Type I...
Entropy within the Cell01:22

Entropy within the Cell

A living cell's primary tasks of obtaining, transforming, and using energy to do work may seem simple. However, the second law of thermodynamics explains why these tasks are harder than they appear. None of the energy transfers in the universe are completely efficient. In every energy transfer, some amount of energy is lost in a form that is unusable. In most cases, this form is heat energy. Thermodynamically, heat energy is defined as the energy transferred from one system to another that is...
Molecular Shapes01:18

Molecular Shapes

Molecules have characteristic shapes that are crucial for their function. The arrangement of various electron groups around the central atom dictates their molecular geometry. Electron pairs in the valence shell of a central atom will adopt an arrangement that minimizes repulsions between the electron pairs by maximizing the distance between them. The valence electrons form either bonding pairs, located primarily between bonded atoms, or lone pairs.Two regions of electron density in a diatomic...

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Related Experiment Video

Updated: Jun 23, 2026

Studying DNA Looping by Single-Molecule FRET
11:27

Studying DNA Looping by Single-Molecule FRET

Published on: June 28, 2014

Molecular order affecting electron transport through ssDNA.

Rudolf Ehlich1, J K Heinrich Hörber

  • 1H.H. Wills Physics Laboratory, University of Bristol, Bristol BS8 1TL, UK. phrame@bris.ac.uk

Ultramicroscopy
|April 28, 2009
PubMed
Summary

Electron transport through DNA molecules is influenced by strand arrangement and surrounding water films. Well-ordered DNA on flat surfaces facilitates better electron transfer for potential photovoltaic applications.

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Related Experiment Videos

Last Updated: Jun 23, 2026

Studying DNA Looping by Single-Molecule FRET
11:27

Studying DNA Looping by Single-Molecule FRET

Published on: June 28, 2014

Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles
10:23

Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles

Published on: May 8, 2015

Parallel High Throughput Single Molecule Kinetic Assay for Site-Specific DNA Cleavage
06:51

Parallel High Throughput Single Molecule Kinetic Assay for Site-Specific DNA Cleavage

Published on: May 6, 2020

Area of Science:

  • Molecular electronics
  • Nanotechnology
  • Biophysics

Background:

  • DNA's stability and tunable structure make it an excellent model for studying electron transport in molecular/conductor systems.
  • Understanding electron transport in DNA is crucial for developing novel photovoltaic devices and energy storage solutions.

Purpose of the Study:

  • To investigate electron transport properties of single-stranded DNA (ssDNA) on gold surfaces and nanodots using scanning tunneling microscopy (STM).
  • To determine how DNA strand alignment and the surrounding environment affect electron transfer efficiency.

Main Methods:

  • Single-stranded DNA was immobilized on Au (111) surfaces and gold nanodots via thiol linkers.
  • Scanning tunneling microscopy (STM) was employed under ambient conditions to measure electron transfer.
  • Electron transfer was analyzed by considering serial resistance from DNA strands and water films.

Main Results:

  • Electron transfer through DNA is governed by the serial resistance of the DNA strands and an associated water film.
  • Well-ordered, parallel DNA arrangements on flat surfaces showed enhanced electron transport compared to disordered arrangements on nanodots.
  • Gold nanodots demonstrate potential for charge production via light absorption, enabling light energy storage.

Conclusions:

  • DNA strand alignment significantly impacts electron transport efficiency, with parallel arrangements being more favorable.
  • The study provides insights into DNA-based molecular electronics and their potential in energy storage and photovoltaic applications.
  • Optimizing DNA structure and surface arrangement is key for efficient electron transport in nanoscale devices.