ARTS1 polymorphisms are associated with ankylosing spondylitis in Koreans
Chan-Bum Choi1, Tae-Hwan Kim, Jae-Bum Jun
1The Hospital for Rheumatic Diseases, Hanyang University, Seoul 133-792, Republic of Korea.
Annals of the Rheumatic Diseases
|May 6, 2009
Summary
Genetic variations in ARTS1 are linked to ankylosing spondylitis (AS) in Koreans. This study confirms a connection in a non-Caucasian population, suggesting shared disease mechanisms.
Area of Science:
- Genetics
- Immunology
- Rheumatology
Background:
- Ankylosing spondylitis (AS) is a chronic inflammatory disease.
- Genetic factors are implicated in AS pathogenesis.
- Previous studies identified associations between ARTS1 polymorphisms and AS in Caucasian populations.
Purpose of the Study:
- To investigate the association between specific ARTS1 single nucleotide polymorphisms (SNPs) and ankylosing spondylitis (AS) in a Korean cohort.
- To determine if previously identified AS-associated ARTS1 SNPs in Caucasians are also relevant in Koreans.
Main Methods:
- A case-control study was conducted with 872 Korean patients with AS and 403 healthy Korean controls.
- Genotyping was performed for five specific ARTS1 SNPs: rs27044, rs17482078, rs10050860, rs30107, and rs2287987.
- Haplotype analysis was performed on associated SNPs.
Main Results:
- SNPs rs27044 and rs30187 in the ARTS1 gene showed a significant association with AS in the Korean population (p < 10(-6)).
- No significant association was found for SNPs rs17482078, rs10050860, and rs2287987.
- Two four-marker haplotypes (GCCT and CCCC) were significantly associated with AS.
Conclusions:
- This study provides the first confirmation of an association between genetic polymorphisms in ARTS1 and AS in a non-Caucasian population.
- The findings suggest that common pathogenetic mechanisms for AS exist in both Korean and Caucasian patients.
- ARTS1 polymorphisms represent a potential genetic risk factor for ankylosing spondylitis in diverse ethnic groups.
Related Concept Videos
Pharmacogenetics of Drug Targets: β₂-Adrenergic Receptors, Apo E, Thymidylate Synthase
Genetic polymorphisms in drug targets have emerged as critical determinants of interindividual variability in drug response and toxicity. Pharmacogenomic investigations increasingly focus on identifying these variations to personalize and optimize therapeutic interventions. A drug target may be a receptor, enzyme, or signaling protein involved in pharmacologic responses or disease-related pathways. While early pharmacogenetic studies focused primarily on drug metabolism, current research...
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Genetic variations significantly influence drug response through pharmacokinetics, receptor interactions, and biologic milieu modifications. Pharmacokinetic alterations impact drug metabolism and clearance, affecting efficacy and toxicity. Variants in drug-metabolizing enzymes, such as CYP2C9 and CYP2C19, alter drug activation and elimination. For example, CYP2C9 loss-of-function variants require lower warfarin doses to prevent excessive bleeding, while CYP2C19 variants reduce clopidogrel...
Genome-wide Association Studies-GWAS
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
Single Nucleotide Polymorphisms-SNPs
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
Drug Toxicity: Risk factors
Adverse Drug Reactions (ADRs) are potential complications that arise during pharmacotherapy, influenced by multiple risk factors. Age plays a significant role; both neonates and the elderly are at heightened risk due to their respective immature and diminished metabolic and elimination processes. Gender also impacts ADRs, with females experiencing a 1.5 to 1.7-fold greater risk than males, which may be linked to pharmacokinetic, pharmacodynamic, and hormonal differences. Notably, neonates, the...

