Related Experiment Video
Updated: Jun 23, 2026

Mass Spectrometry and Luminogenic-based Approaches to Characterize Phase I Metabolic Competency of In Vitro Cell Cultures
Published on: March 28, 2017
Human liver mitochondrial cytochrome P450 2D6--individual variations and implications in drug metabolism
Michelle Cook Sangar1, Hindupur K Anandatheerthavarada, Weigang Tang
1Department of Animal Biology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Abstract:
Constitutively expressed human cytochrome P450 2D6 (CYP2D6; EC 1.14.14.1) is responsible for the metabolism of approximately 25% of drugs in common clinical use. It is widely accepted that CYP2D6 is localized in the endoplasmic reticulum of cells; however, we have identified this enzyme in the mitochondria of human liver samples and found that extensive inter-individual variability exists with respect to the level of the mitochondrial enzyme. Metabolic assays using 7-methoxy-4-aminomethylcoumarin as a substrate show that the human liver mitochondrial enzyme is capable of oxidizing this substrate and that the catalytic activity is supported by mitochondrial electron transfer proteins. In the present study, we show that CYP2D6 contains an N-terminal chimeric signal that mediates its bimodal targeting to the endoplasmic reticulum and mitochondria. In vitro mitochondrial import studies using both N-terminal deletions and point mutations suggest that the mitochondrial targeting signal is localized between residues 23-33 and that the positively-charged residues at positions 24, 25, 26, 28 and 32 are required for mitochondrial targeting. The importance of the positively-charged residues was confirmed by transient transfection of a CYP2D6 mitochondrial targeting signal mutant in COS-7 cells. Both the mitochondria and the microsomes from a CYP2D6 stable expression cell line contain the enzyme and both fractions exhibit bufuralol 1'-hydroxylation activity, which is completely inhibited by CYP2D6 inhibitory antibody. Overall, these results suggest that the targeting of CYP2D6 to mitochondria could be an important physiological process that has significance in xenobiotic metabolism.
Insights
Human cytochrome P450 2D6 (CYP2D6) is found in mitochondria, not just the endoplasmic reticulum. Specific N-terminal signals and charged residues mediate this dual targeting, impacting drug metabolism.
Area of Science:
- Biochemistry
- Cell Biology
- Pharmacology
Background:
- Human cytochrome P450 2D6 (CYP2D6) is crucial for metabolizing ~25% of clinical drugs.
- CYP2D6 was traditionally localized to the endoplasmic reticulum.
- Variability in CYP2D6 levels affects drug efficacy and safety.
Purpose of the Study:
- To investigate the presence and function of CYP2D6 in human liver mitochondria.
- To identify the molecular mechanisms responsible for CYP2D6 targeting to mitochondria.
- To assess the role of mitochondrial CYP2D6 in xenobiotic metabolism.
Main Methods:
- Subcellular fractionation of human liver samples.
- Enzyme kinetic assays using 7-methoxy-4-aminomethylcoumarin.
- In vitro mitochondrial import studies with CYP2D6 mutants.
- Transient transfection of COS-7 cells.
- Bufuralol 1'-hydroxylation assays.
Main Results:
- CYP2D6 was identified in human liver mitochondria, with variable inter-individual levels.
- A bimodal targeting signal in the N-terminus of CYP2D6 directs it to both ER and mitochondria.
- Mitochondrial targeting requires specific positively-charged residues (24, 25, 26, 28, 32) between positions 23-33.
- Mitochondrial CYP2D6 exhibits catalytic activity, supported by mitochondrial electron transfer proteins.
- Both mitochondrial and microsomal fractions showed bufuralol 1'-hydroxylation activity.
Conclusions:
- CYP2D6 is present and active in human liver mitochondria, challenging previous assumptions.
- A novel N-terminal signal mediates dual localization of CYP2D6 to ER and mitochondria.
- Mitochondrial targeting of CYP2D6 is a regulated process involving specific amino acid residues.
- The mitochondrial localization of CYP2D6 may play a significant role in xenobiotic metabolism and drug response variability.
Related Concept Videos
Pharmacogenetics of Phase I Enzymes: Cytochrome P450 Isozymes
Drug toxicity: Idiosyncratic Reactions
Pharmacogenetics of Drug Metabolism: Overview
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Effect of Hepatic Disease on Pharmacokinetics: Drug Dosing and Hepatic Blood Flow
Pharmacogenetics of Phase II Enzymes: N-acetyltransferase, Thiopurine S-methyltransferase, UDP-glucuronosyltransferase

