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Updated: Jun 23, 2026

An Analytical Tool-box for Comprehensive Biochemical, Structural and Transcriptome Evaluation of Oral Biofilms Mediated by Mutans Streptococci
Published on: January 25, 2011
Can the black box be cracked? The augmentation of microbial ecology by high-resolution, automated sensing
Ashley Shade1, Cayelan C Carey, Emily Kara
1Microbiology Doctoral Training Program, University of Wisconsin-Madison, Madison, WI 53706, USA. SHADE@WISC.EDU
Abstract:
Automated sensing technologies, 'ASTs,' are tools that can monitor environmental or microbial-related variables at increasingly high temporal resolution. Microbial ecologists are poised to use AST data to couple microbial structure, function and associated environmental observations on temporal scales pertinent to microbial processes. In the context of aquatic microbiology, we discuss three applications of ASTs: windows on the microbial world, adaptive sampling and adaptive management. We challenge microbial ecologists to push AST potential in helping to reveal relationships between microbial structure and function.
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