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Whole Genome Sequencing for Rapid Characterization of Rabies Virus Using Nanopore Technology
Published on: August 18, 2023
The rhabdoviruses: biodiversity, phylogenetics, and evolution.
I V Kuzmin1, I S Novella, R G Dietzgen
1National Center for Zoonotic, Vectorborne and Enteric Diseases, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA. ikuzmin@cdc.gov
Summary
Rhabdoviruses are diverse animal and plant pathogens. Further genetic characterization is needed to fully understand their evolutionary relationships and taxonomy.
Area of Science:
- Virology
- Evolutionary Biology
- Pathogen Research
Background:
- Rhabdoviruses (family Rhabdoviridae) are significant pathogens affecting both animals and plants.
- Despite shared morphology and genome organization, their evolutionary and ecological understanding has advanced significantly in recent decades.
- Existing research has identified multiple phylogenetic groups within Rhabdoviridae, alongside six established genera.
Purpose of the Study:
- To highlight the progress in understanding rhabdovirus phylogeny, ecology, and evolution.
- To identify gaps in current knowledge regarding the comparative relationships between viral phylogeny and taxonomy.
- To emphasize the need for further genetic characterization of rhabdovirus representatives.
Main Methods:
- Review of advancements in viral surveillance and molecular characterization methodologies.
- Analysis of established rhabdovirus genera and described phylogenetic groups.
- Evaluation of current molecular clock models for rhabdovirus evolution.
Main Results:
- Significant progress has been made in understanding rhabdovirus phylogeny and ecology.
- The relationship between rhabdovirus phylogeny and taxonomy remains incomplete.
- Current molecular clock models offer only partial insights into viral lineage evolutionary dynamics.
Conclusions:
- Further genetic characterization is essential for a comprehensive understanding of rhabdovirus taxonomy and evolution.
- Ongoing research in viral evolution and ecology is crucial for future studies on this diverse viral family.
- The Rhabdoviridae family presents a complex area for continued scientific investigation.
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