Related Experiment Video
Updated: Jun 22, 2026

09:47
Visualization of DNA Compaction in Cyanobacteria by High-voltage Cryo-electron Tomography
Published on: July 17, 2018
Structure of toroidal DNA collapsed inside the phage capsid
Amélie Leforestier1, Françoise Livolant
1Laboratoire de Physique des Solides, Centre Nationale de la Recherche Scientifique, Unité Mixte de Recherche 8502, Bât 510, Université Paris-Sud XI, Centre d'Orsay, Orsay Cedex, France.
Summary
DNA toroids formed hexagonal packing, leading to twist walls and altered DNA pitch. This study reveals how DNA structure is influenced by capsid confinement and cation condensation.
Area of Science:
- Structural biology
- Biophysics
- Molecular biology
Background:
- DNA condensation is crucial for packaging within viral capsids.
- Understanding DNA toroidal structures informs genome organization principles.
Purpose of the Study:
- To investigate the structural organization of DNA toroids within bacteriophage capsids.
- To explore the impact of spermine condensation on DNA packing and helical structure.
Main Methods:
- Cryoelectron microscopy was used to visualize DNA structures.
- Partially filled bacteriophage capsids served as confinement environments.
- Spermine was used as a tetravalent cation to condense DNA.
Main Results:
- DNA toroids exhibited hexagonal packing under specific conditions.
- Frustration between DNA chirality and hexagonal packing induced twist walls.
- DNA helical pitch varied due to helix curvature and correlations.
Conclusions:
- Chirality and hexagonal packing are key factors in DNA toroid formation.
- Twist walls are a consequence of competing structural constraints.
- DNA structure is adaptable within confined viral environments.
Related Concept Videos
DNA Bacteriophages
Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
Lytic Cycle of Bacteriophages
Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the lytic replication...
The DNA Helix
Overview
The DNA Helix
Deoxyribonucleic acid, or DNA, is the genetic material responsible for passing traits from generation to generation in all organisms and most viruses. DNA is composed of two strands of nucleotides that wind around each other to form a spring-like structure called a double helix. However, the double helix is not perfectly symmetrical. Instead, there are regularly occurring grooves in the structure. The major groove occurs where the sugar-phosphate backbones are relatively far apart. This space...
The DNA Helix
Overview
Viral Structure
Viruses are extraordinarily diverse in shape and size, but they all have several structural features in common. All viruses have a core that contains a DNA- or RNA-based genome. The core is surrounded by a protective coat of proteins called the capsid. The capsid is composed of subunits called capsomeres. The capsid and genome-containing core are together known as the nucleocapsid.

