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Related Concept Videos

Comparing Copy Number Variations and SNPs02:26

Comparing Copy Number Variations and SNPs

Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Multiple Sclerosis l: Introduction01:19

Multiple Sclerosis l: Introduction

Multiple sclerosis is a chronic autoimmune disease of the central nervous system (CNS) that affects the brain, spinal cord, and optic nerves. It is an inflammatory demyelinating disorder and a leading cause of neurological disability in young adults.EpidemiologyMS commonly begins between 20 and 40 years of age and is twice as common in women. Its exact cause remains unclear, but genetic susceptibility contributes, with higher risk in first-degree relatives and identical twins. A greater...
Neural Regulation01:37

Neural Regulation

Digestion begins with a cephalic phase that prepares the digestive system to receive food. When our brain processes visual or olfactory information about food, it triggers impulses in the cranial nerves innervating the salivary glands and stomach to prepare for food.
Alzheimer Disease ll: Pathophysiology01:23

Alzheimer Disease ll: Pathophysiology

Alzheimer disease involves structural changes in the brain that begin long before symptoms appear. The most distinctive features are extracellular neuritic plaques and intracellular neurofibrillary tangles.Neuritic plaques form in the cerebral cortex and around blood vessels. These plaques contain a dense core of beta-amyloid (Aβ)—a toxic protein fragment that clumps outside neurons. The core is surrounded by damaged neuronal extensions, as well as reactive astrocytes and microglia. Abnormal...
Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
Parkinson Disease ll: Pathophysiology01:24

Parkinson Disease ll: Pathophysiology

Parkinson disease (PD) is a progressive neurodegenerative disorder primarily affecting movement, with additional non-motor features. Its pathophysiology involves complex interactions among genetic susceptibility, environmental exposures, and cellular dysfunction, including dopaminergic neuron loss, protein aggregation, and mitochondrial impairment.Selective NeurodegenerationA key feature is the degeneration of dopaminergic neurons in the substantia nigra pars compacta, leading to reduced...

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Related Experiment Video

Updated: Jun 22, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
09:34

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Published on: April 4, 2018

SNCA variants are associated with increased risk for multiple system atrophy.

Sonja W Scholz1, Henry Houlden, Claudia Schulte

  • 1Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, 35 Convent Drive, Bethesda, MD 20892, USA. scholzs@mail.nih.gov

Annals of Neurology
|May 29, 2009
PubMed
Summary

Parkinson's disease and multiple system atrophy (MSA) may share genetic roots. A study found specific genetic variations (SNPs) at the SNCA gene significantly increase MSA risk, suggesting a common genetic link.

Related Experiment Videos

Last Updated: Jun 22, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
09:34

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Published on: April 4, 2018

Area of Science:

  • Neurogenetics
  • Neurology
  • Human Genetics

Background:

  • Parkinson's disease (PD) and multiple system atrophy (MSA) are synucleinopathies, neurodegenerative disorders characterized by alpha-synuclein aggregation.
  • While clinically distinct, a shared genetic etiology between PD and MSA has been hypothesized but not definitively established.

Purpose of the Study:

  • To investigate the potential common genetic basis of Parkinson's disease and multiple system atrophy.
  • To identify specific genetic risk factors that may predispose individuals to MSA.

Main Methods:

  • A candidate single nucleotide polymorphism (SNP) association study was conducted using 384 SNPs previously identified in a Parkinson's disease genome-wide association study.
  • The study included 413 MSA cases and 3,974 control subjects, with replication in an additional 108 MSA cases and 537 controls.
  • Statistical analysis focused on identifying significant associations between SNPs and MSA risk.

Main Results:

  • Single nucleotide polymorphisms (SNPs) located at the SNCA gene locus showed a significant association with an increased risk of developing MSA.
  • The combined analysis yielded a highly significant p-value (5.5 x 10(-12)) and an odds ratio of 6.2 for the associated SNPs at the SNCA locus.
  • Replication analysis confirmed the significant association of these SNCA locus SNPs with MSA risk.

Conclusions:

  • The findings strongly suggest a shared genetic etiology between Parkinson's disease and multiple system atrophy.
  • The SNCA gene locus represents a significant genetic risk factor for the development of MSA.
  • This research provides crucial insights into the genetic underpinnings of synucleinopathies and may inform future diagnostic and therapeutic strategies.