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Updated: Jun 22, 2026

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
The tumor suppressor gene hypermethylated in cancer 1 is transcriptionally regulated by E2F1
Mathias Jenal1, Emmanuelle Trinh, Christian Britschgi
1Department of Clinical Research, University of Bern, Switzerland.
Abstract:
The Hypermethylated in Cancer 1 (HIC1) gene encodes a zinc finger transcriptional repressor that cooperates with p53 to suppress cancer development. We and others recently showed that HIC1 is a transcriptional target of p53. To identify additional transcriptional regulators of HIC1, we screened a set of transcription factors for regulation of a human HIC1 promoter reporter. We found that E2F1 strongly activates the full-length HIC1 promoter reporter. Promoter deletions and mutations identified two E2F responsive elements in the HIC1 core promoter region. Moreover, in vivo binding of E2F1 to the HIC1 promoter was shown by chromatin immunoprecipitation assays in human TIG3 fibroblasts expressing tamoxifen-activated E2F1. In agreement, activation of E2F1 in TIG3-E2F1 cells markedly increased HIC1 expression. Interestingly, expression of E2F1 in the p53(-/-) hepatocellular carcinoma cell line Hep3B led to an increase of endogenous HIC1 mRNA, although bisulfite genomic sequencing of the HIC1 promoter revealed that the region bearing the two E2F1 binding sites is hypermethylated. In addition, endogenous E2F1 induced by etoposide treatment bound to the HIC1 promoter. Moreover, inhibition of E2F1 strongly reduced the expression of etoposide-induced HIC1. In conclusion, we identified HIC1 as novel E2F1 transcriptional target in DNA damage responses.
Insights
The Hypermethylated in Cancer 1 (HIC1) gene is a novel transcriptional target of E2F1. E2F1 activation increases HIC1 expression, even in hypermethylated promoters, playing a role in DNA damage responses.
Area of Science:
- Molecular Biology
- Cancer Research
- Gene Regulation
Background:
- The Hypermethylated in Cancer 1 (HIC1) gene is a tumor suppressor and a transcriptional target of p53.
- Identifying other regulators of HIC1 is crucial for understanding its role in cancer development.
Purpose of the Study:
- To identify novel transcriptional regulators of the HIC1 gene.
- To investigate the role of E2F1 in regulating HIC1 expression and its potential involvement in DNA damage responses.
Main Methods:
- Screening of transcription factors using a human HIC1 promoter reporter assay.
- Promoter deletion and mutation analyses to identify E2F responsive elements.
- Chromatin immunoprecipitation (ChIP) assays to confirm in vivo binding of E2F1 to the HIC1 promoter.
- Analysis of HIC1 expression in response to E2F1 activation and DNA damage induction.
Main Results:
- E2F1 strongly activates the HIC1 promoter, with two E2F responsive elements identified in the core promoter region.
- E2F1 binds to the HIC1 promoter in vivo, leading to increased HIC1 expression, even in hypermethylated regions.
- Etoposide-induced DNA damage increases E2F1 binding to the HIC1 promoter and enhances HIC1 expression.
- Inhibition of E2F1 reduces etoposide-induced HIC1 expression.
Conclusions:
- HIC1 is identified as a novel transcriptional target of E2F1.
- E2F1 plays a significant role in regulating HIC1 expression, particularly in the context of DNA damage responses.
- These findings contribute to understanding the complex regulatory network of HIC1 in cancer suppression.
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