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A Method for Selecting Structure-switching Aptamers Applied to a Colorimetric Gold Nanoparticle Assay
Published on: February 28, 2015
Human growth hormone-specific aptamer identification using improved oligonucleotide ligand evolution method
Pinar Calik1, Oğuz Balci, Tunçer H Ozdamar
1Chemical Engineering Department, Middle East Technical University, 06531 Ankara, Turkey. pcalik@metu.edu.tr
This study introduces LEVANT, a novel aptamer-based purification method. LEVANT achieved 99.8% purity for recombinant human growth hormone (rhGH) using a single-step temperature gradient elution, demonstrating its effectiveness for protein purification.
Area of Science:
- Biochemistry
- Biotechnology
- Molecular Biology
Background:
- Protein purification is crucial for biopharmaceutical development.
- Existing methods can be complex and costly.
- Aptamers offer specific molecular recognition for purification applications.
Purpose of the Study:
- To develop and evaluate a single-step aptamer-based protein purification method.
- To optimize aptamer binding conditions for recombinant human growth hormone (rhGH).
- To assess the purity of rhGH purified using the novel method.
Main Methods:
- Developed a ligand (aptamer) evolution technique (LETEG) with temperature gradient elution.
- Utilized negative SELEX to eliminate cross-reactivity with bacterial proteins.
- Investigated the impact of pH and time on aptamer-rhGH binding.
- Characterized binding affinity using Langmuir isotherm and determined elution temperature.
Main Results:
- Optimal aptamer binding to rhGH occurred at pH 7.0.
- Aptamers were eluted using a multi-stage temperature gradient (55-95°C).
- Strongest binding disrupted at 85°C, eluting aptamers at 0.16µM.
- Purified rhGH achieved 99.8% purity.
- Binding affinity constant (K(D)) was 218nM for rhGH.
Conclusions:
- The LEVANT method provides efficient single-step purification of proteins using aptamers.
- The method is effective for purifying anionic proteins like rhGH.
- LETEG demonstrates high applicability and potential for industrial protein purification.
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