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Related Concept Videos

Free Energy01:21

Free Energy

Free energy—abbreviated as G for the scientist Gibbs who discovered it—is a measurement of useful energy that can be extracted from a reaction to do work. It is the energy in a chemical reaction that is available after entropy is accounted for. Reactions that take in energy are considered endergonic and reactions that release energy are exergonic. Plants carry out endergonic reactions by taking in sunlight and carbon dioxide to produce glucose and oxygen. Animals, in turn, break down the...
Gibbs Free Energy02:39

Gibbs Free Energy

One of the challenges of using the second law of thermodynamics to determine if a process is spontaneous is that it requires measurements of the entropy change for the system and the entropy change for the surroundings. An alternative approach involving a new thermodynamic property defined in terms of system properties only was introduced in the late nineteenth century by American mathematician Josiah Willard Gibbs. This new property is called the Gibbs free energy (G) (or simply the free...
Gibbs Free Energy and Thermodynamic Favorability02:23

Gibbs Free Energy and Thermodynamic Favorability

The spontaneity of a process depends upon the temperature of the system. Phase transitions, for example, will proceed spontaneously in one direction or the other depending upon the temperature of the substance in question. Likewise, some chemical reactions can also exhibit temperature-dependent spontaneities. To illustrate this concept, the equation relating free energy change to the enthalpy and entropy changes for the process is considered:
Calculating Standard Free Energy Changes02:49

Calculating Standard Free Energy Changes

The free energy change for a reaction that occurs under the standard conditions of 1 bar pressure and at 298 K is called the standard free energy change. Since free energy is a state function, its value depends only on the conditions of the initial and final states of the system. A convenient and common approach to the calculation of free energy changes for physical and chemical reactions is by use of widely available compilations of standard state thermodynamic data. One method involves the...
An Introduction to Free Energy01:05

An Introduction to Free Energy

How can we compare the energy that releases from one reaction to that of another reaction? We use a measurement of free energy to quantitate these energy transfers. Scientists call this free energy Gibbs free energy (abbreviated with the letter G) after Josiah Willard Gibbs, the scientist who developed the measurement. According to the second law of thermodynamics, all energy transfers involve losing some energy in an unusable form such as heat, resulting in entropy. Gibbs free energy...
Cell Potential and Free Energy02:58

Cell Potential and Free Energy

Thermodynamics of a Redox Reaction
Thermodynamics is the branch of physics dealing with the relationship between heat and other forms of energy. In an electrochemical cell, chemical energy is converted into electrical energy.
Thus, a link can be predicted between cell potential, free energy change, and the equilibrium constant for the reaction. Cell potential can also be measured as the oxidant or the reducing strength, and similar acid-base strength measures are reflected in equilibrium...

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Computational Prediction of Amino Acid Preferences of Potentially Multispecific Peptide-Binding Domains Involved in Protein-Protein Interactions
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Predictive coding under the free-energy principle.

Karl Friston1, Stefan Kiebel

  • 1The Wellcome Trust Centre of Neuroimaging, Institute of Neurology, University College LondonQueen Square, London, UK. k.friston@fil.ion.ucl.ac.uk

Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences
|June 17, 2009
PubMed
Summary
This summary is machine-generated.

The brain predicts and categorizes sensory input by inverting internal hierarchical dynamical models. This free-energy based approach explains how neuronal activity recognizes and predicts sensory states, as shown in birdsong recognition.

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Area of Science:

  • Computational Neuroscience
  • Cognitive Science
  • Machine Learning

Background:

  • The brain's ability to predict and categorize sensory information is fundamental to perception.
  • Existing models often struggle to capture the dynamic and hierarchical nature of sensory processing.

Purpose of the Study:

  • To frame prediction and perceptual categorization as an inference problem solved by the brain.
  • To propose a unified framework for understanding perception based on hierarchical dynamical systems and their inversion.
  • To demonstrate the brain's capacity for implementing this model inversion process.

Main Methods:

  • Modeling the world as a hierarchy of dynamical systems encoding causal structure.
  • Equating perception with the optimization or inversion of these internal models.
  • Utilizing a free-energy bound on model evidence for a generic approach to model inversion.
  • Developing hierarchical dynamical models capable of recognizing and predicting sequences of sensory states.

Main Results:

  • The free-energy formulation provides equations for neuronal activity dynamics during recognition.
  • A general hierarchical dynamical model can recognize and predict trajectories of sensory states.
  • The brain possesses the necessary infrastructure to implement this model inversion process.
  • Simulated birds successfully recognized and categorized birdsongs using the proposed framework.

Conclusions:

  • Perception and categorization can be understood as the brain's inference process using hierarchical dynamical models.
  • Free-energy minimization offers a principled approach to understanding neuronal dynamics in recognition and prediction.
  • This framework provides a biologically plausible mechanism for how the brain learns and interacts with its environment.