Biochemical evidence for translational repression by Arabidopsis microRNAs

Elodie Lanet1, Etienne Delannoy, Rodnay Sormani

  • 1Aix-Marseille Université, Laboratoire de Génétique et Biophysique des Plantes, Marseille, F-13009, France.

The Plant Cell
|June 18, 2009
PubMed

Insights

Plant microRNAs (miRNAs) primarily cleave mRNA, but this study reveals they also repress translation. This translational repression involves miRNAs and ARGONAUTE1 (AGO1) associating with polysomes, providing new insights into gene regulation.

Area of Science:

  • Molecular Biology
  • Plant Science
  • Genetics

Background:

  • MicroRNAs (miRNAs) are key regulators of gene expression via RNA silencing.
  • Animal miRNAs typically inhibit translation, while plant miRNAs are thought to induce mRNA cleavage.

Purpose of the Study:

  • To investigate the mechanism of miRNA action in plants, specifically exploring a potential translational repression role.
  • To provide biochemical evidence for the involvement of miRNAs in translational control in plants.

Main Methods:

  • Polysome fractionation in Arabidopsis thaliana.
  • Analysis of miRNA and ARGONAUTE1 (AGO1) association with polysomes.
  • Examination of miRNA target accumulation in wild-type, ago1 mutant, and 2b protein transgenic plants.

Main Results:

  • A subset of mature miRNAs and AGO1 were found associated with polysomes in Arabidopsis.
  • miRNA targets showed increased accumulation at both mRNA and protein levels in an ago1 mutant.
  • Translational repression, but not mRNA cleavage, was observed in plants expressing the Cucumber mosaic virus 2b protein.
  • Polysome association of miR168 was dependent on AGO1 but not the 2b protein, correlating with translational repression.

Conclusions:

  • This study provides direct biochemical evidence supporting a translational repression role for plant miRNAs.
  • The findings suggest that plant miRNAs, in conjunction with AGO1, can regulate gene expression at the translational level.
  • The mechanism of miRNA-mediated translational repression in plants is linked to the association of miRNA-AGO1 complexes with polysomes.

Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
Translational Regulation01:29

Translational Regulation

Translational regulation in prokaryotes ensures efficient protein synthesis by controlling ribosome access to mRNA. This regulation is mediated by secondary RNA structures, including translational riboswitches, RNA thermometers, and small RNAs (sRNAs), which respond to intracellular and environmental signals to modulate gene expression.Translational RiboswitchesRiboswitches in the leader region of mRNAs can regulate translation by altering the accessibility of the Shine-Dalgarno (SD) sequence,...
Riboswitches01:56

Riboswitches

Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...