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Single-Molecule Real-Time Visualization of DNA Unwinding by CMG Helicase
Published on: September 27, 2024
The flexible loop of the human cytomegalovirus DNA polymerase processivity factor ppUL44 is required for efficient
Gualtiero Alvisi1, Daniela Martino Roth, Daria Camozzi
1Dipartimento di Ematologia e Scienze Oncologiche L.A. Seragnoli, Università Degli Studi di Bologna, Italy. gualtiero_alvisi@med.uni-heidelberg.de
Abstract:
Phosphoprotein ppUL44 of the human cytomegalovirus (HCMV) DNA polymerase plays an essential role in viral replication, conferring processivity to the DNA polymerase catalytic subunit pUL54 by tethering it to the DNA. Here, for the first time, we examine in living cells the function of the highly flexible loop of ppUL44 (UL44-FL; residues 162 to 174 [PHTRVKRNVKKAP(174)]), which has been proposed to be directly involved in ppUL44's interaction with DNA. In particular, we use a variety of approaches in transfected cells to characterize in detail the behavior of ppUL44Deltaloop, a mutant derivative in which three of the five basic residues within UL44-FL are replaced by nonbasic amino acids. Our results indicate that ppUL44Deltaloop is functional in dimerization and binding to pUL54 but strongly impaired in binding nuclear structures within the nucleus, as shown by its inability to form nuclear speckles, reduced nuclear accumulation, and increased intranuclear mobility compared to wild-type ppUL44. Moreover, analysis of cellular fractions after detergent and DNase treatment indicates that ppUL44Deltaloop is strongly reduced in DNA-binding ability, in similar fashion to ppUL44-L86A/L87A, a point mutant derivative impaired in dimerization. Finally, ppUL44Deltaloop fails to transcomplement HCMV oriLyt-dependent DNA replication in cells and also inhibits replication in the presence of wild-type ppUL44, possibly via formation of heterodimers defective for double-stranded DNA binding. UL44-FL thus emerges for the first time as an important determinant for HCMV replication in cells, with potential implications for the development of novel antiviral approaches by targeting HCMV replication.
Insights
The flexible loop of human cytomegalovirus (HCMV) phosphoprotein ppUL44 is crucial for viral DNA replication. Mutating this loop impairs ppUL44
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- Human cytomegalovirus (HCMV) phosphoprotein ppUL44 is essential for viral replication.
- ppUL44 tethers the DNA polymerase catalytic subunit pUL54 to DNA, conferring processivity.
- A flexible loop (UL44-FL) in ppUL44 is proposed to mediate DNA interaction.
Purpose of the Study:
- To investigate the function of the ppUL44 flexible loop (UL44-FL) in living cells.
- To characterize the behavior of a ppUL44 mutant (ppUL44Deltaloop) with altered basic residues in UL44-FL.
- To determine the role of UL44-FL in HCMV replication and potential antiviral strategies.
Main Methods:
- Transfection of cells with wild-type and mutant ppUL44 constructs.
- Analysis of nuclear localization, nuclear speckle formation, and intranuclear mobility.
- Biochemical assays including detergent and DNase treatment of cellular fractions.
- Assessment of HCMV oriLyt-dependent DNA replication and transcomplementation assays.
Main Results:
- ppUL44Deltaloop retains pUL54 binding and dimerization but shows impaired nuclear localization and DNA binding.
- Mutant ppUL44 fails to form nuclear speckles and exhibits increased intranuclear mobility.
- ppUL44Deltaloop cannot support HCMV DNA replication and inhibits wild-type ppUL44 function.
- UL44-FL is critical for ppUL44's DNA-binding ability and essential for viral replication.
Conclusions:
- The flexible loop (UL44-FL) of ppUL44 is a key determinant for HCMV DNA replication.
- UL44-FL's role in nuclear localization and DNA binding is essential for viral replication.
- Targeting UL44-FL offers a potential strategy for developing novel antiviral therapies against HCMV.
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