Related Experiment Video
Updated: Jun 21, 2026

12:08
Generating Transgenic Plants with Single-copy Insertions Using BIBAC-GW Binary Vector
Published on: March 28, 2018
Effects of non-B DNA sequences on transgene expression
Hiroyuki Kamiya1, Hitomi Goto, Hideyoshi Harashima
1Faculty of Pharmaceutical Sciences, Hokkaido University, Kita-ku, Sapporo 060-0812, Japan. hirokam@pharm.hokudai.ac.jp
Journal of Bioscience and Bioengineering
|July 7, 2009
Summary
Unusual DNA conformations, like Z-DNA and B'-DNA, can significantly enhance gene transcription. Introducing these non-B DNA sequences into a beta-actin promoter boosted transgene expression in cells and mouse livers.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA structure and conformation play a critical role in regulating gene expression.
- Unusual DNA conformations, beyond the standard B-DNA form, are known to exist but their impact on gene transcription is not fully understood.
Purpose of the Study:
- To investigate the effect of specific non-B DNA conformations on transgene expression.
- To determine if introducing sequences that adopt B' and Z conformations can enhance gene transcription.
Main Methods:
- Engineered DNA sequences, A(30) (B' conformation) and (CG)(15) (Z conformation), were inserted into a beta-actin promoter.
- Luciferase reporter plasmids with the modified promoters were created.
- Transfection into NIH3T3 cells via electroporation and delivery into mouse livers via hydrodynamics-based injection were performed.
Main Results:
- The (CG)(15) sequence (Z-DNA) significantly increased luciferase expression compared to the control.
- The A(30) sequence (B'-DNA) also showed a trend towards enhanced gene expression.
- Non-B DNA sequences demonstrably influenced transgene expression levels.
Conclusions:
- Non-B DNA conformations can serve as potent enhancers of gene transcription.
- The strategic use of unusual DNA sequences offers a novel approach to improve transgene expression in gene therapy and research applications.
Related Concept Videos
DNA-only Transposons
DNA-only transposons are called autonomous transposons since they code for the enzyme transposase that is required for the transposition mechanism. Insertion of transposons can alter gene functions in multiple ways. They can mutate the gene, alter gene expression by introducing a novel promoter or insulator sequence, introduce new splice sites, and change the mRNA transcripts produced, or remodel chromatin structure.
The donor site from where the transposon is excised is either degraded or...
The donor site from where the transposon is excised is either degraded or...
Transgenic Organisms
Overview
Non-LTR Retrotransposons
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
Cis-regulatory Sequences
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
Reporter Genes
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...
Commonly used reporter...
In-vitro Mutagenesis
To learn more about the function of a gene, researchers can observe what happens when the gene is inactivated or “knocked out,” by creating genetically engineered knockout animals. Knockout mice have been particularly useful as models for human diseases such as cancer, Parkinson’s disease, and diabetes.

