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Published on: April 25, 2014
Characterization of pncA mutations of pyrazinamide-resistant Mycobacterium tuberculosis in Turkey
1Medical Faculty of Trakya University, Department of Clinical Microbiology and Infectious Diseases, Edirne, Turkey.
Abstract:
Mutations in the pyrazinamidase (PZase) gene (pncA) are considered the major mechanism of pyrazinamide (PZA) resistance in Mycobacterium tuberculosis. The aim of this study was designed to determine pncA mutations among ten PZA resistant and two PZA susceptible M. tuberculosis strains from Turkey and also to compare the PZase activity of them with the genotype. All isolates were identified by BACTEC NAP (P-nitro-alpha-acetylamino-beta-hydroxy-propiophenone) test and PCR-RFLP (Polymerase Chain Reaction- Restriction Fragment Length Polymorphism) method. Drug sensitivity tests were performed by BACTEC system. PncA mutations were detected by DNA sequence analysis. No mutation was detected in two PZA susceptible and three out of ten PZA resistant strains. While, two of the PZA resistant strains had mutations in the same region (Gly24Asp), two of the PZA resistant strains had mutations in different regions (Thr160Lys), (His51Pro). Three of the PZA resistant strains had frameshift as a 167 bp deletion at nucleotide position 102. As a result, we detected two new mutations and a frameshift which may be responsible for PZA resistance in this study different from the other studies which previously 51st codon mutation was reported.
Insights
Mutations in the pyrazinamidase (PZase) gene (pncA) are a primary cause of pyrazinamide (PZA) resistance in Mycobacterium tuberculosis. This study identified novel pncA mutations and a frameshift deletion in Turkish strains, contributing to understanding PZA resistance mechanisms.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Pyrazinamide (PZA) is a crucial first-line drug for treating Mycobacterium tuberculosis infections.
- Resistance to PZA is often mediated by mutations in the pyrazinamidase (PZase) gene (pncA).
Purpose of the Study:
- To investigate pncA mutations in PZA-resistant and susceptible Mycobacterium tuberculosis strains from Turkey.
- To correlate genotypic findings with pyrazinamidase enzyme activity.
Main Methods:
- Bacterial identification using BACTEC NAP.
- Drug susceptibility testing via the BACTEC system.
- Molecular analysis including PCR-RFLP and DNA sequencing for pncA mutations.
Main Results:
- No pncA mutations were found in susceptible strains or three resistant strains.
- Identified known mutations (Gly24Asp, Thr160Lys, His51Pro) in resistant strains.
- Discovered two new mutations and a 167 bp frameshift deletion at nucleotide position 102 in resistant strains.
Conclusions:
- pncA mutations are key drivers of PZA resistance in Mycobacterium tuberculosis.
- This study identified novel mutations and a frameshift deletion, expanding the known spectrum of PZA resistance mechanisms.
- Findings contribute to a better understanding of genotypic-phenotypic correlations in PZA resistance.
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