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Updated: Jun 21, 2026

Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions
Published on: June 28, 2018
p21(WAF1) gene promoter is epigenetically silenced by CTIP2 and SUV39H1
T Cherrier1, S Suzanne, L Redel
1Université de Strasbourg, Institut de Virologie, France.
Abstract:
Mainly regulated at the transcriptional level, the cellular cyclin-dependent kinase inhibitor, CDKN1A/p21(WAF1) (p21), is a major cell cycle regulator of the response to DNA damage, senescence and tumor suppression. Here, we report that COUP-TF-interacting protein 2 (CTIP2), recruited to the p21 gene promoter, silenced p21 gene transcription through interactions with histone deacetylases and methyltransferases. Importantly, treatment with the specific SUV39H1 inhibitor, chaetocin, repressed histone H3 lysine 9 trimethylation at the p21 gene promoter, stimulated p21 gene expression and induced cell cycle arrest. In addition, CTIP2 and SUV39H1 were recruited to the silenced p21 gene promoter to cooperatively inhibit p21 gene transcription. Induction of p21(WAF1) gene upon human immunodeficiency virus 1 (HIV-1) infection benefits viral expression in macrophages. Here, we report that CTIP2 further abolishes Vpr-mediated stimulation of p21, thereby indirectly contributing to HIV-1 latency. Altogether, our results suggest that CTIP2 is a constitutive p21 gene suppressor that cooperates with SUV39H1 and histone methylation to silence the p21 gene transcription.
Insights
COUP-TF-interacting protein 2 (CTIP2) silences the cell cycle regulator p21 gene transcription by interacting with histone modifiers. CTIP2 cooperates with SUV39H1 and histone methylation to suppress p21, impacting HIV-1 latency.
Area of Science:
- Molecular Biology
- Epigenetics
- Cell Cycle Regulation
Background:
- The cyclin-dependent kinase inhibitor CDKN1A/p21(WAF1) (p21) is a key regulator of cell cycle arrest in response to DNA damage, senescence, and tumor suppression.
- p21 is primarily regulated at the transcriptional level.
Purpose of the Study:
- To investigate the role of COUP-TF-interacting protein 2 (CTIP2) in regulating p21 gene transcription.
- To elucidate the mechanism by which CTIP2 silences p21.
- To determine the involvement of CTIP2 in HIV-1 infection and latency.
Main Methods:
- Chromatin immunoprecipitation assays to assess protein recruitment to the p21 gene promoter.
- Treatment with the SUV39H1 inhibitor chaetocin.
- Analysis of p21 gene expression and cell cycle arrest.
- Investigation of CTIP2 and SUV39H1 interaction and recruitment.
Main Results:
- CTIP2 is recruited to the p21 gene promoter and silences its transcription via interactions with histone deacetylases and methyltransferases.
- Inhibition of SUV39H1 with chaetocin repressed H3K9 trimethylation, stimulated p21 expression, and induced cell cycle arrest.
- CTIP2 and SUV39H1 cooperatively inhibit p21 transcription at the promoter.
- CTIP2 abolishes Vpr-mediated p21 stimulation, contributing to HIV-1 latency.
Conclusions:
- CTIP2 acts as a constitutive suppressor of p21 gene transcription.
- CTIP2 collaborates with SUV39H1 and histone methylation to silence p21.
- This mechanism plays a role in regulating cell cycle arrest and potentially contributes to HIV-1 latency.
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