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Updated: Jun 21, 2026

Identifying Caspases and their Motifs that Cleave Proteins During Influenza A Virus Infection
Published on: July 21, 2022
Influenza A virus-induced caspase-3 cleaves the histone deacetylase 6 in infected epithelial cells
Matloob Husain1, Kevin S Harrod
1Lovelace Respiratory Research Institute, Albuquerque, NM 87108, USA. mhusain@lrri.org
Insights
Histone deacetylase 6 (HDAC6) is cleaved by caspase-3 during influenza A virus (IAV) infection. This cleavage impacts HDAC6 function and may play a role in IAV-induced apoptosis.
Area of Science:
- Molecular Biology
- Virology
- Cellular Biology
Background:
- Histone deacetylase 6 (HDAC6) is a key cytoplasmic enzyme regulating diverse biological processes.
- Emerging evidence suggests a role for HDAC6 in viral infections, but its regulation in infected cells remains unclear.
- Understanding HDAC6 regulation during viral infection is crucial for elucidating host-pathogen interactions.
Purpose of the Study:
- To investigate the post-translational modification and regulation of HDAC6 in influenza A virus (IAV)-infected cells.
- To identify specific enzymes responsible for HDAC6 cleavage during IAV infection.
- To determine the functional significance of HDAC6 cleavage in the context of IAV-induced apoptosis.
Main Methods:
- Western blot analysis to detect cleaved HDAC6 in IAV-infected cells.
- Identification of caspase-3 cleavage motif (DMAD-S) within the HDAC6 polypeptide.
- In vitro assays to confirm HDAC6 as a direct substrate of caspase-3.
Main Results:
- HDAC6 undergoes caspase-3-mediated cleavage in cells infected with influenza A virus.
- The C-terminal ubiquitin-binding zinc finger domain of HDAC6 is removed upon cleavage.
- HDAC6 is confirmed as a direct substrate of caspase-3, with a specific cleavage motif identified.
Conclusions:
- Caspase-3 activation leads to the specific cleavage of HDAC6 during influenza A virus infection.
- The cleavage of HDAC6 may alter its function and contribute to the apoptotic processes induced by IAV.
- This study reveals a novel regulatory mechanism of HDAC6 in virus-infected cells, highlighting its potential role in viral pathogenesis.
Abstract:
Histone deacetylase 6 (HDAC6) is a multi-substrate cytoplasmic enzyme that regulates many important biological processes. Recently, some reports have implicated HDAC6 in viral infection. However, nothing is known about its regulation in virus-infected cells. The data presented here for the first time demonstrate the caspase-3-mediated cleavage of HDAC6 in influenza A virus (IAV)-infected cells. HDAC6 polypeptide contains the caspase-3 cleavage motif DMAD-S at the C-terminus, and is a caspase-3 substrate. The cleavage removes most of the C-terminal ubiquitin-binding zinc finger domain from HDAC6, which could be significant for HDAC6's role in IAV-induced apoptosis in infected cells.
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