Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

DNA Microarrays02:34

DNA Microarrays

Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

APOL1-risk alleles modulate T-cell receptor signaling to promote allograft rejection.

The Journal of clinical investigation·2026
Same author

Ameliorating calcium homeostasis improves longevity and healthspan in progeroid and naturally aged mice.

Nature communications·2026
Same author

Que/n-HA/PGCL microspheres orchestrate bone repair via context-dependent osteoimmune mechanisms: a transcriptomic dissection of direct and immune-mediated signaling.

Frontiers in immunology·2026
Same author

p63 in skin homeostasis and disease: molecular mechanisms and therapeutic potentials.

Cell death discovery·2026
Same author

A screen of Salmonella enterica mutants interacting with fresh onions and alfalfa sprouts.

International journal of food microbiology·2026
Same author

Amelioration of psoriasis-like skin lesions by human amniotic mesenchymal stem cells: insights from multiomics profiling in mice.

Frontiers in immunology·2026

Related Experiment Video

Updated: Jun 21, 2026

Generation of Two-color Antigen Microarrays for the Simultaneous Detection of IgG and IgM Autoantibodies
10:16

Generation of Two-color Antigen Microarrays for the Simultaneous Detection of IgG and IgM Autoantibodies

Published on: September 15, 2016

WebArrayDB: cross-platform microarray data analysis and public data repository.

Xiao-Qin Xia1, Michael McClelland, Steffen Porwollik

  • 1Vaccine Research Institute San Diego, San Diego, CA 92121, USA. xqxia70@gmail.com

Bioinformatics (Oxford, England)
|July 16, 2009
PubMed
Summary

WebArrayDB is an open-source tool for cross-platform microarray data analysis. It enables researchers to store, integrate, and analyze large datasets from diverse array platforms efficiently.

More Related Videos

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
07:41

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

Published on: May 17, 2019

Related Experiment Videos

Last Updated: Jun 21, 2026

Generation of Two-color Antigen Microarrays for the Simultaneous Detection of IgG and IgM Autoantibodies
10:16

Generation of Two-color Antigen Microarrays for the Simultaneous Detection of IgG and IgM Autoantibodies

Published on: September 15, 2016

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
07:41

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

Published on: May 17, 2019

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Genomics

Background:

  • Cross-platform microarray analysis is crucial but lacks integrated open-source tools.
  • Researchers need efficient methods for storing and analyzing diverse microarray data.

Purpose of the Study:

  • To develop an open-source integrated database and analysis suite for microarray data.
  • To facilitate cross-platform analysis and data mining.

Main Methods:

  • Developed WebArrayDB, an integrated microarray database and analysis suite.
  • Implemented MIAME-compliant data storage and R-based analysis tools.
  • Included various statistical methods for differential analysis and handling systematic bias.

Main Results:

  • WebArrayDB allows convenient data uploading and MIAME-compliant storage.
  • Supports data mining across multiple platforms using diverse R-based tools.
  • Offers flexible analysis models and parallel computation capabilities.

Conclusions:

  • WebArrayDB provides a comprehensive solution for cross-platform microarray data management and analysis.
  • The tool is accessible via a public web server or downloadable package.