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Updated: Jun 21, 2026

Quantitation of γH2AX Foci in Tissue Samples
Published on: June 28, 2010
H2AX phosphorylation as a genotoxicity endpoint
Gary Peter Watters1, Daniel James Smart, James Stephen Harvey
1Institute for Cell and Molecular Biosciences, The Medical School, Newcastle University, Framlington Place, Newcastle Upon Tyne NE2 4HH, UK.
Abstract:
The gammaH2AX focus assay, based on phosphorylation of the variant histone protein H2AX, was evaluated as a genotoxicity test in immortalised wild-type mouse embryonic fibroblasts (MEFs) treated for 4h with a panel of reference compounds routinely used in genotoxicity testing. The topoisomerase II poison etoposide (0.006-60 microg/ml), the alkylating agent methyl methanesulfonate (1.3-65 microg/ml) and the direct DNA-damaging agent bleomycin (0.1-10 microg/ml) all produced a positive concentration-response relationship. The non-genotoxic compounds ampicillin (0.035-3500 microg/ml) and sodium chloride (0.058-580 microg/ml) showed no such response with increased concentrations. The H2AX phosphorylation results were compared with the outcome of two standard in vitro genotoxicity tests, namely the micronucleus and comet assays. Compounds that produced measurable DNA damage in the focus assay generated micronuclei at comparable concentrations. In this study, the focus assay identified genotoxic agents with the same specificity as the comet assay. These results were substantiated when H2AX phosphorylation was analysed using flow cytometry in the murine cell line L5178Y, growing in suspension. The data were in concordance with the manual scoring focus assay. To further this investigation, the gammaH2AX flow cytometry was compared to the in vitro micronucleus flow cytometry and mouse lymphoma assay using the same cell population after MMS treatment. The median gammaH2AX value increased significantly above the control at all four MMS concentrations tested. The percentage of micronucleus events in the in vitro micronucleus flow test and the mutation frequency in the mouse lymphoma assay were also significantly increased at each MMS concentration. The current data indicate that H2AX phosphorylation could be used as a biomarker of genotoxicity, which could predict the outcome of in vitro mammalian cell genotoxicity assays.
Insights
The gammaH2AX focus assay effectively identifies genotoxic agents by detecting DNA damage. This method, measuring H2AX phosphorylation, shows promise as a reliable biomarker for predicting outcomes in mammalian cell genotoxicity tests.
Area of Science:
- Biochemistry
- Molecular Biology
- Toxicology
Background:
- The gammaH2AX focus assay detects DNA double-strand breaks via H2AX phosphorylation.
- Established genotoxicity tests include the micronucleus and comet assays.
Purpose of the Study:
- To evaluate the gammaH2AX focus assay as a genotoxicity test.
- To compare its performance against standard in vitro assays.
Main Methods:
- Immortalised wild-type mouse embryonic fibroblasts (MEFs) were treated with reference genotoxic and non-genotoxic compounds.
- H2AX phosphorylation was measured using focus assay and flow cytometry.
- Results were compared with micronucleus and comet assays.
Main Results:
- Genotoxic agents (etoposide, methyl methanesulfonate, bleomycin) induced a positive concentration-response relationship.
- Non-genotoxic compounds (ampicillin, sodium chloride) did not.
- gammaH2AX assay showed comparable specificity to the comet assay and predicted micronucleus formation.
- Flow cytometry analysis of gammaH2AX correlated with manual scoring and other assays.
Conclusions:
- H2AX phosphorylation serves as a reliable biomarker for genotoxicity.
- The gammaH2AX assay can predict the outcomes of standard in vitro mammalian cell genotoxicity tests.
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