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Haplotype-based case-control study between human apurinic/apyrimidinic endonuclease 1/redox effector factor-1 gene
Takahiro Naganuma1, Tomohiro Nakayama, Naoyuki Sato
1Division of Molecular Diagnostics, Department of Advanced Medical Science, Nihon University School of Medicine, Itabashi-ku, Tokyo, Japan.
Objectives:
The aim of this study was to investigate the relationship between cerebral infarction (CI) and the human apurinic/apyrimidinic endonuclease 1/redox effector factor-1 (APE1/REF-1) gene using single-nucleotide polymorphisms (SNPs) and a haplotype-based case-control study.
Design And Methods:
We selected 5 SNPs in the human APE1/REF1 gene (rs1760944, rs3136814, rs17111967, rs3136817 and rs1130409), and performed case-control studies in 177 CI patients and 309 control subjects.
Results:
rs17111967 was found to have no heterogeneity in Japanese. The overall distribution of the haplotype-based case-control study constructed by rs1760944, rs3136814 and rs1130409 showed a significant difference. The frequency of the G-C-T haplotype was significantly higher in the CI group than in the control group (2.5% vs. 0.0%, p>0.001).
Conclusions:
Based on the results of the haplotype-based case-control-study, the G-C-T haplotype may be a genetic marker of CI, and the APE1/REF-1 gene may be a CI susceptibility gene.
