Related Experiment Video
Updated: Jun 21, 2026

Cerebellar Regional Dissection for Molecular Analysis
Published on: December 5, 2020
Identification of CACNA1A large deletions in four patients with episodic ataxia
Florence Riant1, Christelle Lescoat, Katayoun Vahedi
1AP-HP, Groupe hospitalier Lariboisière-Fernand Widal, Laboratoire de Génétique, GHU Nord, Paris, France. florence.riant@lrb.aphp.fr
Abstract:
Episodic ataxia is an autosomal dominant ion channel disorder characterized by paroxysmal attacks of incoordination. Episodic ataxia type 2 (EA2) is caused by mutations in CACNA1A. EA2 mutations are mostly nonsense and sometimes missense mutations. However, in some typical EA2 families, CACNA1A sequencing does not detect any point mutation. Herein, we have designed a quantitative multiplex polymerase chain reaction of short fluorescent fragment test to screen the 50 exons of CACNA1A and investigated 27 probands referred for molecular diagnosis of EA2 who did not show any point mutation in CACNA1A. We have identified four different exonic deletions in four patients with a typical EA2 phenotype. These results establish the need to complete sequencing analysis by a screening for deletions to ensure an accurate molecular diagnosis of EA2.
Insights
Episodic ataxia type 2 (EA2), an inherited neurological disorder, can be caused by deletions in the CACNA1A gene. Screening for these deletions is crucial for accurate molecular diagnosis of EA2.
Area of Science:
- Genetics
- Neurology
- Molecular Biology
Background:
- Episodic ataxia type 2 (EA2) is an autosomal dominant ion channel disorder.
- It is typically caused by mutations in the CACNA1A gene, often nonsense or missense mutations.
- However, some families with typical EA2 phenotypes lack detectable point mutations in CACNA1A.
Observation:
- A quantitative multiplex polymerase chain reaction (PCR) assay was developed to screen all 50 exons of the CACNA1A gene.
- Twenty-seven probands with suspected EA2, previously negative for point mutations, were investigated using this assay.
- Four distinct exonic deletions in CACNA1A were identified in four patients exhibiting a typical EA2 phenotype.
Findings:
- Exonic deletions represent a significant cause of EA2 in patients negative for point mutations.
- The developed PCR assay effectively detects these exonic deletions within the CACNA1A gene.
- This study highlights the necessity of including deletion screening in the molecular diagnostic workup for EA2.
Implications:
- Expanding molecular diagnostic strategies to include deletion analysis will improve the diagnostic yield for EA2.
- Accurate genetic diagnosis of EA2 is essential for genetic counseling and potential therapeutic strategies.
- Understanding the full spectrum of CACNA1A mutations provides deeper insights into ion channel function and neurological disorders.
More Related Videos
08:22A Novel Strategy Combining Array-CGH, Whole-exome Sequencing and In Utero Electroporation in Rodents to Identify Causative Genes for Brain Malformations
Published on: December 1, 2017
09:34Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018