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Related Concept Videos

Lagging Strand Synthesis01:59

Lagging Strand Synthesis

During replication, the complementary strands in double-stranded DNA are synthesized at different rates. Replication first begins on the leading strand. Replication starts later, occurs more slowly, and proceeds discontinuously on the lagging strand.
There are several major differences between synthesis of the leading strand and synthesis of the lagging strand. 1) Leading strand synthesis happens in the direction of replication fork opening, whereas lagging strand synthesis happens in the...
PCR01:32

PCR

Overview
ATP and Macromolecule Synthesis01:28

ATP and Macromolecule Synthesis

Biological macromolecules are organic compounds, predominantly composed of carbon atoms. The carbon atoms are covalently bonded with hydrogen, oxygen, nitrogen, and other minor elements. There are four major biological macromolecule classes: carbohydrates, lipids, proteins, and nucleic acids.
Most macromolecules are composed of single subunits, or building blocks, called monomers. The monomers combine with each other using covalent bonds to form larger molecules known as polymers.
Conversion of...
Olefin Metathesis Polymerization: Overview01:13

Olefin Metathesis Polymerization: Overview

Recently, the development of olefin metathesis polymerization advanced the field of polymer synthesis. Simply put, the reorganization of substituents on their double bonds between two olefins in the presence of a catalyst is known as the olefin metathesis reaction. The use of metathesis reaction for polymer synthesis is called olefin metathesis polymerization.
Ruthenium-based Grubbs catalyst is the most commonly used catalyst for olefin metathesis polymerization. Grubbs catalyst consists of a...
The Replisome03:01

The Replisome

DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
Proofreading01:31

Proofreading

Synthesis of new DNA molecules is carried out by the enzyme DNA polymerase, which adds nucleotides on the daughter strand complementary to the template DNA strand. DNA polymerase has a higher affinity to add the correct base and ensures fidelity during DNA replication. Furthermore,  it exhibits proofreading activity during replication, using an exonuclease domain that cuts off incorrect nucleotides from the nascent DNA strand.
Errors During Replication are Corrected by the DNA Polymerase Enzyme

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Related Experiment Video

Updated: Jun 21, 2026

Protocol for the Solid-phase Synthesis of Oligomers of RNA Containing a 2'-O-thiophenylmethyl Modification and Characterization via Circular Dichroism
11:37

Protocol for the Solid-phase Synthesis of Oligomers of RNA Containing a 2'-O-thiophenylmethyl Modification and Characterization via Circular Dichroism

Published on: July 28, 2017

Primer fabrication using polymerase mediated oligonucleotide synthesis.

Murray J Cairns1, Torsten Thomas, Carolina E Beltran

  • 1Schizophrenia Research Institute, Sydney, NSW 2006, Australia. murray.cairns@newcastle.edu.au

BMC Genomics
|August 1, 2009
PubMed
Summary

Polymerase mediated oligonucleotide synthesis (PMOS) offers a cost-effective and rapid method for generating gene-specific primers. This novel approach utilizes DNA polymerase to synthesize primers, potentially replacing traditional, expensive custom synthesis methods.

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Area of Science:

  • Genomics
  • Molecular Biology
  • Biotechnology

Background:

  • Custom solid-phase oligonucleotide synthesis is crucial for genomics but is expensive, time-consuming, and wasteful.
  • Existing methods for producing oligonucleotide primers do not meet the demand for speed and cost-efficiency.

Purpose of the Study:

  • To introduce and validate a novel method for oligonucleotide synthesis using DNA polymerase.
  • To demonstrate the efficiency and applicability of polymerase mediated oligonucleotide synthesis (PMOS) for generating gene-specific primers.

Main Methods:

  • Utilized a DNA polymerase to increase oligonucleotide hybridization affinity using a template for DNA synthesis.
  • Developed a universal 768-member oligonucleotide library (UniSeq) for PMOS.
  • Evaluated PMOS performance in Polymerase Chain Reaction (PCR) and DNA sequencing reactions.

Main Results:

  • PMOS successfully generated specific 11-mer primers from a small precursor library.
  • The primers produced via PMOS performed comparably to those from custom synthesis in PCR and sequencing.
  • Demonstrated the ability to generate primers directly in the laboratory for various DNA polymerase chemistries.

Conclusions:

  • PMOS is a broadly applicable and novel system for oligonucleotide synthesis.
  • This method has the potential to replace conventional, expensive oligonucleotide synthesis.
  • PMOS offers a faster, more cost-effective, and less wasteful alternative for primer generation.