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Updated: Jun 21, 2026

Quantification of Hypopigmentation Activity In Vitro
Published on: March 6, 2019
Melanoma hyperpigmentation is strongly associated with KIT alterations
Julie M Wu1, Hector Alvarez, Patricia García
1Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.
Abstract:
KIT alterations have been identified in melanoma and treatment with imatinib has met with some success. However, the relationship between KIT and melanoma histology remains uncharacterized, and its role in melanoma pathogenesis unknown. We evaluated 70 melanomas from 70 patients seen at a single institution from 1997 to 2008. Cases were analyzed for KIT protein expression relative to histologic variables: subtype, sun damage, tumor infiltrating lymphocytes, melanoma in situ, vertical growth phase (VGP), location, and hyperpigmentation. Twenty-eight cases demonstrated 3+ membranous staining. Univariate analysis revealed 5 significant variables: sun damage (inverse, P = 0.015), tumor location (trunk>extremities>head and neck, P = 0.005), subtype (epithelioid>spindle, mixed>desmoplastic, P < 0.001), VGP (inverse, P = 0.024), and hyperpigmentation [22/26 (85% hyperpigmented cases) and 6/44 (14% nonhyperpigmented cases), P < 0.001]. Upon multivariate analysis, only hyperpigmentation and VGP remained statistically significant (P = 0.002, P = 0.019). Mutational analyses for KIT exons 9 and 11, and BRAF were performed on cases with 3+ labeling. Two of 27 of cases contained mutations in KIT exon 11, whereas only 1 case contained a V600E BRAF mutation, suggesting that KIT and BRAF mutations may be redundant events. Although KIT mutations were uncommon overall, pigmentation in conjunction with immunohistochemistry and nodular growth phase raised their frequency to 2 (40%) of 5 cases. We expand the context of KIT aberrations to involve areas other than acral and mucosal sites and demonstrate an inverse relationship between KIT abnormalities and sun damage. There is a strong correlation to hyperpigmentation that overrides factors including sun damage, tumor location, and histologic subtype, which may be used to identify cases with KIT aberrations.
Insights
KIT alterations are linked to melanoma, particularly in hyperpigmented tumors with vertical growth. This finding may help identify patients who could benefit from targeted therapies.
Area of Science:
- Oncology
- Dermatology
- Molecular Biology
Background:
- KIT alterations are implicated in melanoma pathogenesis.
- Imatinib treatment shows some efficacy, but KIT's role in melanoma histology is unclear.
- Understanding KIT's relationship with histological features is crucial for targeted therapy selection.
Purpose of the Study:
- To investigate the association between KIT protein expression and various melanoma histological features.
- To determine the correlation of KIT alterations with clinical and pathological variables.
- To identify histological indicators that may predict KIT aberrations in melanoma.
Main Methods:
- Evaluated KIT protein expression via immunohistochemistry in 70 melanoma cases.
- Analyzed KIT expression against histological variables: subtype, sun damage, tumor-infiltrating lymphocytes, in situ component, vertical growth phase (VGP), location, and hyperpigmentation.
- Performed mutational analyses for KIT exons 9 and 11, and BRAF on cases with high KIT expression.
Main Results:
- High KIT expression (3+ membranous staining) was observed in 28 cases.
- Significant univariate associations included inverse relationships with sun damage and VGP, and correlations with tumor location, subtype, and hyperpigmentation.
- Multivariate analysis identified hyperpigmentation (P = 0.002) and VGP (P = 0.019) as statistically significant predictors of high KIT expression.
- KIT mutations were uncommon (2/27 in exon 11), with only one BRAF V600E mutation found.
- The frequency of KIT aberrations increased to 40% in cases with hyperpigmentation and VGP.
Conclusions:
- KIT aberrations are not limited to acral or mucosal melanomas.
- There is an inverse relationship between KIT abnormalities and sun damage.
- Hyperpigmentation is a strong predictor of KIT aberrations, overriding other histological factors.
- Histological features like hyperpigmentation and VGP can help identify melanomas with potential KIT aberrations for further investigation and targeted therapy.
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