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Updated: Jun 21, 2026

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Staphylococcus massiliensis sp. nov., isolated from a human brain abscess
Mouhamad Al Masalma1, Didier Raoult1, Véronique Roux1
1Laboratoire de Bactériologie - Virologie, Hôpital de la Timone, URMITE CNRS-IRD UMR 6236, IFR48, 264 rue Saint-Pierre, 13385 Marseille, Cedex 05, France.
A novel Staphylococcus species, Staphylococcus massiliensis, was identified from a human brain abscess. This Gram-positive bacterium, strain 5402776(T), represents a new species based on detailed phenotypic and genotypic analyses.
Area of Science:
- Microbiology
- Bacteriology
- Taxonomy
Background:
- Brain abscesses can be caused by various microorganisms.
- Accurate identification and classification of bacterial pathogens are crucial for effective treatment and understanding disease pathogenesis.
- The genus Staphylococcus comprises diverse species, some of which are opportunistic pathogens.
Purpose of the Study:
- To characterize and classify a novel bacterial isolate from a human brain abscess.
- To determine the phylogenetic relationships of the novel strain within the Staphylococcus genus.
- To propose a new species designation based on comprehensive taxonomic data.
Main Methods:
- Isolation and cultivation of the bacterial strain from a human brain abscess sample.
- Polyphasic taxonomic analysis including cellular morphology, biochemical tests, and cell wall composition analysis (peptidoglycan type, respiratory quinones, fatty acids).
- Genomic analysis involving DNA G+C content determination and phylogenetic analysis based on 16S rRNA, tuf, hsp60, rpoB, dnaJ, and sodA gene sequences.
Main Results:
- The isolate (strain 5402776(T)) was identified as Gram-positive, catalase-positive, coagulase-negative, non-motile, non-fermentative, and novobiocin-susceptible cocci.
- Fatty acid profiles and peptidoglycan type were determined.
- Phylogenetic analyses indicated that the strain represents a novel species, most closely related to Staphylococcus piscifermentans and Staphylococcus pettenkoferi, but distinct enough for new species status.
- DNA G+C content was 36.6 mol%.
Conclusions:
- Strain 5402776(T) represents a novel species within the genus Staphylococcus.
- The proposed name for this new species is Staphylococcus massiliensis sp. nov.
- This finding expands the known diversity of Staphylococcus species and highlights the importance of continued microbiological investigation.
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