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A genomic perspective on vitamin D signaling
Carsten Carlberg1, Sabine Seuter
1Life Sciences Research Unit, University of Luxembourg, Luxembourg. carsten.carlberg@uni.lu
Abstract:
The vitamin D receptor (VDR) is a ligand-inducible transcription factor whose target genes play key roles in cellular metabolism, bone formation, cellular growth, differentiation and in controlling inflammation. Many of these VDR target genes are also involved in dysregulated pathways leading to common human diseases, such as cancer. The activation of VDR by natural and synthetic ligands may improve such pathological conditions. On a genomic level, these pathways converge on regulatory modules, some of which contain VDR-binding sites, so-called vitamin D response elements (VDREs). Transcriptome analysis, chromatin immunoprecipitation scans and in silico screening approaches have already identified many genomic targets of the VDR. Important cancer regulatory modules with VDREs should have a major impact on understanding the role and potential therapeutic value of VDR in cancer.
Insights
The vitamin D receptor (VDR) influences genes vital for health and disease, including cancer. Activating VDR may offer therapeutic benefits by targeting specific genomic sites involved in disease pathways.
Area of Science:
- Molecular Biology
- Genetics
- Oncology
Background:
- The vitamin D receptor (VDR) is a transcription factor regulating genes critical for cellular functions like metabolism, bone health, growth, and inflammation.
- Dysregulation of VDR target genes is implicated in common human diseases, notably cancer.
- VDR activation by ligands presents a potential therapeutic strategy for these pathological conditions.
Purpose of the Study:
- To explore the role of VDR and its target genes in disease pathways, particularly cancer.
- To identify and understand the significance of VDR-binding sites (VDREs) within genomic regulatory modules.
- To assess the potential therapeutic value of VDR in cancer treatment.
Main Methods:
- Genome-wide identification of VDR targets using transcriptome analysis.
- Chromatin immunoprecipitation (ChIP) scans to map VDR-binding sites.
- In silico screening approaches to identify regulatory modules containing VDREs.
Main Results:
- Numerous genomic targets of VDR have been identified through various screening methods.
- Key cancer-related regulatory modules containing VDREs have been pinpointed.
- These findings highlight the convergence of disease pathways on VDR-regulated genomic elements.
Conclusions:
- VDR plays a crucial role in cellular processes and its dysregulation is linked to diseases like cancer.
- Understanding VDR's genomic targets and regulatory modules is essential for developing VDR-based therapies.
- The identified cancer-related regulatory modules with VDREs hold significant potential for advancing VDR-targeted cancer treatment strategies.
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