Cabin1 restrains p53 activity on chromatin

Hyonchol Jang1, Soo-Youn Choi, Eun-Jung Cho

  • 1National Research Laboratory for Metabolic Checkpoint, Department of Biomedical Sciences & Biochemistry, Cancer Research Institute, Seoul National University College of Medicine, Seoul, Republic of Korea.

Insights

Calcineurin binding protein 1 (Cabin1) acts as a negative regulator of the tumor suppressor p53. Cabin1 binding represses p53 activity on target genes in quiescent cells, enabling a faster response to DNA damage.

Area of Science:

  • Molecular Biology
  • Cell Biology
  • Cancer Research

Background:

  • The tumor suppressor p53 is a key regulator of cellular responses to genotoxic stress.
  • p53 is known to bind target promoters upon DNA damage, but its presence on some promoters without stress suggests regulation by inhibitors.
  • Understanding p53 regulation is crucial for cancer therapy development.

Purpose of the Study:

  • To identify negative regulators of p53 transcriptional activity in the absence of genotoxic stress.
  • To elucidate the mechanism by which p53 activity is repressed in quiescent cells.
  • To investigate the role of Cabin1 in p53-mediated gene regulation and cellular response to DNA damage.

Main Methods:

  • Co-immunoprecipitation to demonstrate physical interaction between p53 and Cabin1.
  • Chromatin immunoprecipitation followed by sequencing (ChIP-seq) to map p53 and Cabin1 occupancy on target promoters.
  • Histone modification analysis (e.g., acetylation) and p53 acetylation assays.
  • Gene expression analysis (e.g., qRT-PCR, Western blotting) to assess p53 target gene activation.
  • Cell growth and viability assays following Cabin1 knockdown and DNA damage induction.

Main Results:

  • Calcineurin binding protein 1 (Cabin1) was identified as a negative regulator of p53.
  • Cabin1 physically interacts with p53 on specific target promoters, repressing its transcriptional activity.
  • Cabin1 regulates histone modifications and p53 acetylation, contributing to transcriptional repression in quiescent cells.
  • Downregulation of Cabin1 leads to the activation of a subset of p53 target genes.
  • Cabin1 knockdown enhances p53-dependent cell growth retardation and cell death following DNA damage.

Conclusions:

  • Cabin1 acts as a critical inhibitor of p53 function on chromatin in the quiescent state.
  • The repression of p53 by Cabin1 allows for the maintenance of inactive p53 on promoters, facilitating a prompt cellular response upon DNA damage.
  • Targeting the Cabin1-p53 interaction could be a potential therapeutic strategy in cancer treatment.

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