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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Cabin1 restrains p53 activity on chromatin
Hyonchol Jang1, Soo-Youn Choi, Eun-Jung Cho
1National Research Laboratory for Metabolic Checkpoint, Department of Biomedical Sciences & Biochemistry, Cancer Research Institute, Seoul National University College of Medicine, Seoul, Republic of Korea.
Calcineurin binding protein 1 (Cabin1) acts as a negative regulator of the tumor suppressor p53. Cabin1 binding represses p53 activity on target genes in quiescent cells, enabling a faster response to DNA damage.
Area of Science:
- Molecular Biology
- Cell Biology
- Cancer Research
Background:
- The tumor suppressor p53 is a key regulator of cellular responses to genotoxic stress.
- p53 is known to bind target promoters upon DNA damage, but its presence on some promoters without stress suggests regulation by inhibitors.
- Understanding p53 regulation is crucial for cancer therapy development.
Purpose of the Study:
- To identify negative regulators of p53 transcriptional activity in the absence of genotoxic stress.
- To elucidate the mechanism by which p53 activity is repressed in quiescent cells.
- To investigate the role of Cabin1 in p53-mediated gene regulation and cellular response to DNA damage.
Main Methods:
- Co-immunoprecipitation to demonstrate physical interaction between p53 and Cabin1.
- Chromatin immunoprecipitation followed by sequencing (ChIP-seq) to map p53 and Cabin1 occupancy on target promoters.
- Histone modification analysis (e.g., acetylation) and p53 acetylation assays.
- Gene expression analysis (e.g., qRT-PCR, Western blotting) to assess p53 target gene activation.
- Cell growth and viability assays following Cabin1 knockdown and DNA damage induction.
Main Results:
- Calcineurin binding protein 1 (Cabin1) was identified as a negative regulator of p53.
- Cabin1 physically interacts with p53 on specific target promoters, repressing its transcriptional activity.
- Cabin1 regulates histone modifications and p53 acetylation, contributing to transcriptional repression in quiescent cells.
- Downregulation of Cabin1 leads to the activation of a subset of p53 target genes.
- Cabin1 knockdown enhances p53-dependent cell growth retardation and cell death following DNA damage.
Conclusions:
- Cabin1 acts as a critical inhibitor of p53 function on chromatin in the quiescent state.
- The repression of p53 by Cabin1 allows for the maintenance of inactive p53 on promoters, facilitating a prompt cellular response upon DNA damage.
- Targeting the Cabin1-p53 interaction could be a potential therapeutic strategy in cancer treatment.
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