Related Experiment Video
Updated: Jun 20, 2026

ARL Spectral Fitting as an Application to Augment Spectral Data via Franck-Condon Lineshape Analysis and Color Analysis
Published on: August 19, 2021
YADA: a tool for taking the most out of high-resolution spectra
Paulo C Carvalho1, Tao Xu, Xuemei Han
1Systems Engineering and Computer Science Program, COPPE, Federal University of Rio de Janeiro, Caixa Postal 68511, 21941-972 Rio de Janeiro-RJ, Brazil. paulo@pcarvalho.com
Unlabelled:
YADA can deisotope and decharge high-resolution mass spectra from large peptide molecules, link the precursor monoisotopic peak information to the corresponding tandem mass spectrum, and account for different co-fragmenting ion species (multiplexed spectra). We describe how YADA enables a pipeline consisting of ProLuCID and DTASelect for analyzing large-scale middle-down proteomics data.
Availability:
http://fields.scripps.edu/yada
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