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Updated: Jun 20, 2026

In vitro Organoid Culture of Primary Mouse Colon Tumors
Published on: May 17, 2013
Heterogeneous gene expression changes in colorectal cancer cells share the WNT pathway in response to growth
Bostjan Humar1, Les McNoe, Anita Dunbier
1Cancer Genetics Laboratory, Department of Biochemistry; University of Otago, Dunedin, Aotearoa New Zealand;
Abstract:
Cyclooxygenase-2 (COX-2), the prostaglandin (PG)-synthesizing enzyme overexpressed in colorectal cancer (CRC), has pleiotropic, cancer-promoting effects. COX-2 inhibitors (CIBs) interfere with many cancer-associated processes and show promising antineoplastic activity, however, a common mechanism of CIB action has not yet been established. We therefore investigated by microarray the global response towards the CIB APHS at a dose significantly inhibiting the growth of three COX-2-positive CRC but not of two COX-2-negative cell lines. None of the genes significantly (p = 0.005) affected by APHS were common to all three cell lines and 83% of the altered pathways were cell line-specific. Quantitative polymerase chain reaction (QPCR) on selected pathways confirmed cell line-specific expression alterations induced by APHS. A low stringency data analysis approach using BRB array tools coupled with QPCR, however, identified small expression changes shared by all COX-2-positive cell lines in genes related to the WNT pathway, the key driver of colonic carcinogenesis. Our data indicates a substantial cell line-specificity of APHS-induced expression alterations in CRC cells and helps to explain the divergent effects reported for CIBs. Further, the shared inhibition of the WNT pathway by APHS suggests one potential common mechanism behind the antineoplastic effects of COX-2 inhibition.
Insights
Cyclooxygenase-2 (COX-2) inhibitors show antineoplastic activity in colorectal cancer (CRC). APHS affects cell lines differently, but commonly inhibits the WNT pathway in COX-2-positive CRC, suggesting a shared anticancer mechanism.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Research
Background:
- Cyclooxygenase-2 (COX-2) is overexpressed in colorectal cancer (CRC) and promotes tumor growth.
- COX-2 inhibitors (CIBs) exhibit antineoplastic effects, but their common mechanism of action remains unclear.
Purpose of the Study:
- To investigate the global gene expression response to the CIB APHS in CRC cell lines.
- To identify common mechanisms of CIB action, particularly in COX-2-positive CRC.
Main Methods:
- Microarray analysis of gene expression in CRC cell lines treated with APHS.
- Quantitative polymerase chain reaction (QPCR) for validating gene expression changes.
- BRB array tools for low stringency data analysis.
Main Results:
- APHS induced significant gene expression alterations, with 83% of affected pathways being cell line-specific.
- No common significantly affected genes were found across all cell lines.
- A shared, albeit small, expression change in WNT pathway genes was identified in COX-2-positive CRC cells.
Conclusions:
- APHS exhibits substantial cell line-specific effects in CRC.
- The shared inhibition of the WNT pathway by APHS may represent a common mechanism for COX-2 inhibitor antineoplastic activity in CRC.
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