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Detection of Horizontal Gene Transfer Mediated by Natural Conjugative Plasmids in E. coli
Published on: March 24, 2023
Increased prevalence of plasmid-mediated quinolone resistance determinants in chicken Escherichia coli isolates from
Si-Yang Huang1, Lei Dai, Li-Ning Xia
1National Center for Veterinary Drug Safety Evaluation, College of Veterinary Medicine, China Agricultural University, Beijing, People's Republic of China.
Abstract:
To evaluate the temporal change in the plasmid-mediated quinolone resistance (PMQR) determinants from 2001 to 2007 in chicken, a total of 532 chicken Escherichia coli isolates were screened for PMQR determinants by polymerase chain reaction and sequencing. The prevalence of qnr genes, aa(6')-Ib-cr, and qepA were 9.8%, 11.7%, and 0.75%, respectively. Among the qnr determinants, qnrA-, qnrB-, and qnrS-type genes were detected in 4 (0.75%), 21 (3.9%), and 27 (5.1%) of the examined isolates, respectively. None of the isolates carried qnrC gene. Ciprofloxacin resistance increased over time (p < 0.01), and a clear trend of increase in the prevalence of qnr and aac(6')-Ib-cr genes among the isolates was shown from 2001 to 2007 (p < 0.01). Pulsed-field gel analysis showed that the PMQR-positive isolates were not clonally related and genetically diverse. Quinolone resistance was transferred by conjugation from qnrB-, qnrS-, and aac(6')-Ib-cr-positive isolates to recipient E. coli. The qnrB and aac(6')-Ib-cr alleles were located on the plasmids with the size of 49 and 50 kb, respectively. However, the qnrS alleles were located on different plasmids with sizes from 57.4 to 88.6 kb, indicating diverse genetic backgrounds. The increasing frequency of ciprofloxacin resistance in E. coli was associated with increasing prevalence of qnr genes and aac(6')-Ib-cr (r(s) = 0.964, p = 0.00045). This survey showed that PMQR determinants were highly prevalent in chicken E. coli isolates in China with a trend of increase from 2001 to 2007. Horizontal transfer and widespread use of quinolone antimicrobials may have contributed to the spread of PMQR determinants in the poultry production system. The widespread dissemination of PMQR could potentially fuel the rapid development of fluoroquinolones resistance.
Insights
Plasmid-mediated quinolone resistance (PMQR) determinants in chicken E. coli increased significantly from 2001 to 2007 in China. This rise in resistance genes, like qnr and aac(6)-Ib-cr, correlates with increased ciprofloxacin resistance, posing a threat to public health.
Area of Science:
- Veterinary Microbiology
- Antimicrobial Resistance
- Molecular Epidemiology
Background:
- Plasmid-mediated quinolone resistance (PMQR) determinants are a growing concern in food-producing animals.
- Understanding the temporal dynamics of PMQR in poultry is crucial for monitoring resistance trends.
Purpose of the Study:
- To evaluate the temporal changes in PMQR determinants in chicken Escherichia coli isolates between 2001 and 2007.
- To investigate the association between PMQR prevalence and ciprofloxacin resistance.
Main Methods:
- Screening of 532 chicken E. coli isolates for PMQR determinants using PCR and sequencing.
- Analysis of gene prevalence, including qnr genes, aac(6')-Ib-cr, and qepA.
- Pulsed-field gel electrophoresis and plasmid analysis to assess genetic diversity and transferability.
Main Results:
- Prevalence of qnr genes, aac(6')-Ib-cr, and qepA were 9.8%, 11.7%, and 0.75%, respectively.
- Significant increase in ciprofloxacin resistance and PMQR gene prevalence from 2001 to 2007 (p < 0.01).
- PMQR determinants were transferable via conjugation and located on diverse plasmids.
Conclusions:
- PMQR determinants are highly prevalent and increasing in chicken E. coli in China.
- Horizontal gene transfer and quinolone use likely drive PMQR spread in poultry.
- Widespread PMQR dissemination may accelerate fluoroquinolone resistance development.
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