Related Experiment Video
Updated: Jun 20, 2026

Assay for Pathogen-Associated Molecular Pattern (PAMP)-Triggered Immunity (PTI) in Plants
Published on: September 9, 2009
Assay for pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) in plants
Suma Chakravarthy1, André C Velásquez, Gregory B Martin
1Boyce Thompson Institute for Plant Research, Cornell University.
Plants detect pathogens using pattern recognition receptors (PRRs) to trigger immunity (PTI). This study presents a new cell death assay in N. benthamiana to measure PTI effectiveness against pathogen suppression.
Area of Science:
- Plant pathology
- Molecular plant-microbe interactions
- Plant immunity
Background:
- Plants utilize pattern recognition receptors (PRRs) to detect conserved microbial features, known as pathogen-associated molecular patterns (PAMPs).
- This recognition initiates PAMP-triggered immunity (PTI), a crucial defense mechanism preventing pathogen colonization.
- Pathogens can suppress PTI using effectors, while plants may employ effector-triggered immunity (ETI) to counter these suppressors.
Purpose of the Study:
- To develop and standardize a novel cell death-based assay for evaluating PAMP-triggered immunity (PTI) in plants.
- To assess the efficacy of PTI in preventing pathogen-induced cell death using a standardized experimental setup.
- To validate the assay's utility in model systems like Nicotiana benthamiana for studying plant-pathogen interactions.
Main Methods:
- A cell death assay was adapted and standardized in Nicotiana benthamiana, a model for plant-pathogen studies.
- PTI was induced by infiltrating a non-pathogenic bacterial strain into leaves.
- Seven hours post-induction, a second challenge inoculation (pathogenic or ETI-activating strain) was applied to an overlapping zone to assess PTI's protective effect.
Main Results:
- PTI induction successfully delayed or prevented cell death caused by the subsequent challenge inoculation in control plants.
- The appearance of cell death in the overlapping zone indicated a breakdown of PTI.
- Plants with silenced FLS2, a key component of PTI, showed compromised ability to resist challenge inoculations, validating the assay's sensitivity.
Conclusions:
- The developed cell death assay effectively measures the functional status of PAMP-triggered immunity (PTI).
- This assay provides a valuable tool for dissecting the mechanisms of PTI and its suppression by pathogens.
- The findings highlight the importance of the FLS2 pathway in PTI and offer a standardized method for future research in plant immunity.
More Related Videos
11:50Bacterial Leaf Infiltration Assay for Fine Characterization of Plant Defense Responses using the Arabidopsis thaliana-Pseudomonas syringae Pathosystem
Published on: October 1, 2015
04:11Pattern-Triggered Oxidative Burst and Seedling Growth Inhibition Assays in Arabidopsis thaliana
Published on: May 21, 2019
Related Concept Videos
Defenses Against Pathogens and Herbivores
Cell Signaling in Plants
Microbe-Plant Interactions
Rapid Identification of Pathogens