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Related Concept Videos

Cryo-electron Microscopy01:28

Cryo-electron Microscopy

Conventional electron microscopy (EM) involves dehydration, fixation, and staining of biological samples, which distorts the native state of biological molecules and results in several artifacts. Also, the high-energy electron beam damages the sample and makes it difficult to obtain high-resolution images. These issues can be addressed using cryo-EM, which uses frozen samples and gentler electron beams. The technique was developed by Jacques Dubochet, Joachim Frank, and Richard Henderson, for...
Electron Microscope Tomography and Single-particle Reconstruction01:07

Electron Microscope Tomography and Single-particle Reconstruction

Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...

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Related Experiment Video

Updated: Jun 20, 2026

Single Particle Cryo-Electron Microscopy: From Sample to Structure
11:52

Single Particle Cryo-Electron Microscopy: From Sample to Structure

Published on: May 29, 2021

Exploring conformational modes of macromolecular assemblies by multiparticle cryo-EM.

Christian M T Spahn1, Pawel A Penczek

  • 1Institut für Medizinische Physik und Biophysik, Charite - Universitätsmedizin Berlin, Ziegelstrasse 5-9, 10117-Berlin, Germany. christian.spahn@charite.de

Current Opinion in Structural Biology
|September 22, 2009
PubMed
Summary

Single particle cryo-electron microscopy (cryo-EM) determines macromolecular structures. Addressing sample heterogeneity with computational methods enhances cryo-EM for visualizing molecular conformational changes.

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Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction
09:25

Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction

Published on: January 9, 2015

Related Experiment Videos

Last Updated: Jun 20, 2026

Single Particle Cryo-Electron Microscopy: From Sample to Structure
11:52

Single Particle Cryo-Electron Microscopy: From Sample to Structure

Published on: May 29, 2021

Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction
09:25

Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction

Published on: January 9, 2015

Area of Science:

  • Structural Biology
  • Biophysics
  • Biochemistry

Background:

  • Single particle cryo-electron microscopy (cryo-EM) is a powerful technique for determining the structures of large macromolecular complexes under near-physiological conditions.
  • While high-resolution structures have been achieved for symmetric molecules, most biological complexes exhibit conformational variability crucial for their function.
  • This inherent heterogeneity presents a significant challenge for traditional cryo-EM analysis.

Purpose of the Study:

  • To highlight the challenge of sample heterogeneity in cryo-electron microscopy.
  • To discuss the development and application of computational multiparticle approaches for analyzing heterogeneous samples.
  • To position cryo-EM as a key method for visualizing dynamic molecular processes.

Main Methods:

  • Review of experimental and computational strategies for addressing sample heterogeneity in cryo-EM.
  • Focus on multiparticle analysis techniques designed to resolve conformational variability.
  • Application of these methods to visualize dynamic macromolecular complexes.

Main Results:

  • Cryo-EM can achieve high resolution, enabling backbone tracing for symmetric molecules.
  • Conformational heterogeneity is common in macromolecular complexes and essential for their function.
  • Computational multiparticle approaches are effective in overcoming heterogeneity challenges.

Conclusions:

  • Sample heterogeneity is a major challenge in cryo-EM, necessitating advanced computational strategies.
  • The development of multiparticle approaches is advancing the capabilities of cryo-EM.
  • Cryo-EM is poised to become an indispensable tool for visualizing the dynamic conformational states of macromolecular machines.