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Related Concept Videos

Radical Reactivity: Overview01:11

Radical Reactivity: Overview

Radicals, the highly reactive species, gain stability by undergoing three different reactions. The first reaction involves a radical-radical coupling, in which a radical combines with another radical, forming a spin‐paired molecule. The second reaction is between a radical and a spin‐paired molecule, generating a new radical and a new spin‐paired molecule. The third reaction is radical decomposition in a unimolecular reaction, forming a new radical and a spin‐paired molecule. These three...
Radical Formation: Abstraction00:47

Radical Formation: Abstraction

The electron of an atom can be abstracted from a compound by a relatively unstable radical to generate a new radical of relatively greater stability. For example, an initiator which forms radicals by homolysis can abstract a suitable species like a hydrogen atom or a halogen atom from a compound to generate a new radical. This ability of radicals to propagate by abstraction is a crucial feature of radical chain reactions.
Even though homolysis produces radicals, it is different from radical...
Radical Formation: Homolysis00:54

Radical Formation: Homolysis

A bond is formed between two atoms by sharing two electrons. When this bond is broken by supplying sufficient energy, either two electrons can be taken up by one atom forming ions by the cleavage called heterolysis, or the two electrons are shared by two atoms, with one each creating radicals by the cleavage called homolysis.
Radical Reactivity: Steric Effects01:10

Radical Reactivity: Steric Effects

The presence of electron-donating, electron-withdrawing, or conjugating groups adjacent to a radical center, imparts electronic stabilization to the radicals. Examples of such electronically-stabilized radicals are triphenylmethyl, tetramethylpiperidine‐N‐oxide, and 2,2‐diphenyl‐1‐picrylhydrazyl. These radicals are remarkably stable and are known as persistent radicals. Some of the persistent radicals can even be isolated and purified.
Along with electronic factors, steric factors also account...
Radical Anti-Markovnikov Addition to Alkenes: Mechanism01:17

Radical Anti-Markovnikov Addition to Alkenes: Mechanism

The reaction of hydrogen bromide with alkenes in the presence of hydroperoxides or peroxides proceeds via anti-Markovnikov addition. The radical chain reaction comprises initiation, propagation, and termination steps.
The mechanism starts with chain initiation, which involves two steps. In the first chain initiation step, a weak peroxide bond is homolytically cleaved upon mild heating to form two alkoxy radicals. In the second initiation step, a hydrogen atom is abstracted by the alkoxy radical...
Radical Formation: Overview01:03

Radical Formation: Overview

A bond can be broken either by heterolytic bond cleavage to form ions or homolytic bond cleavage to yield radicals. A fishhook arrow is used to represent the motion of a single electron in homolytic bond cleavage. There are two main sources from which radicals can be formed:
Radicals from spin-paired molecules:
Radicals can be obtained from spin-paired molecules either by homolysis or electron transfer. While two radicals are formed in the former, an electron is added in the latter, also known...

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Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics
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A molecular dynamics study of the hydroxyl radical in solution applying self-interaction-corrected density functional

Joost VandeVondele1, Michiel Sprik

  • 1Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, UK CB2 1EW. jv244@cam.ac.uk

Physical Chemistry Chemical Physics : PCCP
|October 1, 2009
PubMed
Summary

Self-interaction corrected density functional theory simulations reveal new insights into hydroxyl radical solvation. The hydroxyl radical acts as a hydrogen bond donor within a mobile solvation cage, differing from previous generalized gradient approximation findings.

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Area of Science:

  • Computational Chemistry
  • Physical Chemistry
  • Theoretical Chemistry

Background:

  • Density Functional Theory (DFT) is a powerful tool for molecular simulations.
  • Self-interaction error (SIE) can affect the accuracy of DFT calculations, particularly for open-shell systems like the hydroxyl radical (*OH).
  • Generalized Gradient Approximation (GGA) methods, while common, may introduce artifacts due to SIE.

Purpose of the Study:

  • To investigate the solvation of the hydroxyl radical (*OH) in solution using DFT with Self-Interaction Corrected (SIC) methods.
  • To evaluate a new empirical SIC functional against existing methods and reference calculations.
  • To provide a more accurate description of *OH solvation and its interactions with water molecules.

Main Methods:

  • Ab initio molecular dynamics (MD) simulations based on DFT.
  • Application of a restricted open-shell formulation with SIC, including two established correction formulas and a novel empirical functional.
  • Validation of the new functional using gas-phase radical cation and hydroxyl water dimers.

Main Results:

  • SIC-based MD simulations reveal a different solvation structure for *OH compared to GGA.
  • The artifactual hemibonded water observed in GGA simulations is absent with SIC methods.
  • *OH primarily acts as a hydrogen bond donor, accepting fewer than two hydrogen bonds on average.
  • The solvation shell is characterized by mobile hydrogen bonds and a quasi-hydrophobic cage.

Conclusions:

  • The proposed SIC scheme offers a computationally efficient and accurate approach for modeling *OH solvation.
  • SIC methods can mitigate self-interaction errors, leading to more reliable DFT simulation results.
  • This approach may broaden the applicability of DFT to complex chemical systems where SIE is significant.