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Related Concept Videos

Plasmids01:28

Plasmids

Plasmids are extrachromosomal DNA molecules found in bacteria, archaea, and some eukaryotic microbes like yeast. These small, circular DNA structures typically contain fewer than 30 genes, although some may exist linearly. Plasmids vary in their number within a cell, known as copy number. Single-copy plasmids are present in one copy per cell and multi-copy plasmids are present in multiple copies, reaching over 100 copies per cell.Plasmids usually replicate independently of the chromosomal DNA...
Overview of Transposition and Recombination02:13

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Transposons make up a significant part of genomes of various organisms. Therefore, it is believed that transposition played a major evolutionary role in speciation by changing genome sizes and modifying gene expression patterns. For example, in bacteria, transposition can lead to conferring antibiotic resistance. Movement of transposable elements within the genetic pool of pathogenic bacteria can aid in transfer of antibiotic-resistant genetic elements. In eukaryotes, transposons can carry out...
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DNA Bacteriophages

Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
Transposons01:24

Transposons

Transposons, or "jumping genes," are small mobile genetic elements (MGEs) that range from 700 to 40,000 base pairs in length. They are found in all organisms and can move within the same chromosome or transfer to different chromosomes. In some cases, transposons can also jump between different host DNA molecules, such as plasmids or viruses, contributing to genetic variability.Barbara McClintock first discovered these mobile genetic elements in the 1940s while studying maize genetics, and she...
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Genomic DNA in Prokaryotes00:46

Genomic DNA in Prokaryotes

The genome of most prokaryotic organisms consists of double-stranded DNA organized into one circular chromosome in a region of cytoplasm called the nucleoid. The chromosome is tightly wound, or supercoiled, for efficient storage. Prokaryotes also contain other circular pieces of DNA called plasmids. These plasmids are smaller than the chromosome and often carry genes that confer adaptive functions, such as antibiotic resistance.
Genomic Diversity in Bacteria
Although bacterial genomes are much...

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Plasmid-derived DNA Strand Displacement Gates for Implementing Chemical Reaction Networks
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Analysis of genetic toggle switch systems encoded on plasmids.

Adiel Loinger1, Ofer Biham

  • 1Racah Institute of Physics, The Hebrew University, Jerusalem 91904, Israel.

Physical Review Letters
|October 2, 2009
PubMed
Summary

Genetic switch systems on plasmids behave differently based on copy number. Higher plasmid counts increase switching stability, reversing the stability of exclusive versus general switches compared to chromosomal systems.

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Area of Science:

  • Synthetic biology
  • Systems biology
  • Genetic engineering

Background:

  • Genetic switch systems utilize mutual repression between transcription factors.
  • Previous studies focused on single-copy chromosomal gene expression.

Purpose of the Study:

  • Investigate the impact of plasmid copy number on genetic switch behavior.
  • Determine how plasmid copy number affects the stability of exclusive and general genetic switches.

Main Methods:

  • Stochastic modeling of genetic switch systems.
  • Analysis of gene expression dynamics on plasmids.
  • Comparison of switch stability under varying plasmid copy numbers.

Main Results:

  • Plasmid copy number significantly influences genetic switch dynamics.
  • Increased plasmid copy number enhances the average time between spontaneous switching events.
  • The stability of general switches surpasses exclusive switches at high plasmid copy numbers, a reversal of chromosomal gene expression findings.

Conclusions:

  • Plasmid-based genetic switches exhibit distinct behaviors compared to chromosomal systems.
  • The stability of genetic switches is tunable via plasmid copy number.
  • Experimental validation using synthetic biology approaches is feasible and recommended.