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Updated: Jun 19, 2026

A Protocol for Computer-Based Protein Structure and Function Prediction
Published on: November 3, 2011
[Protein structure prediction from analogy. I. New database of spatially similar and dissimilar structures of protein
Abstract:
The paper describes creation and analysis of a database 3Dfold_test. This database consists of a large set of pairs of spatially-similar structures of protein domains and of an accompanying, much larger control set of "decoys", i.e., spatially-dissimilar protein structures, having approximately the same size and compactness as each member of a pair of spatially-similar proteins. The database 3Dfold_test can be found at the site http://phys.protres.ru/resources/prediction analogy/3Dfold/.
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