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Phage Phenomics: Physiological Approaches to Characterize Novel Viral Proteins
Published on: June 11, 2015
Current insights into phage biodiversity and biogeography.
1Florida International University, Department of Biological Sciences, Biscayne Bay Campus, Marine Science 355, 3000 NE 151st Street, North Miami, FL 33181, USA. rvegathurber@gmail.com
Current Opinion in Microbiology
|October 9, 2009
Summary
Phage ecology is revealing that phage communities are not uniform across environments. Research shows specific phage biogeography and recurring temporal patterns, impacting ecosystem function.
Area of Science:
- Microbiology
- Ecology
- Environmental Science
Background:
- Bacteriophages (phages) are critical drivers of bacterial evolution and ecosystem processes.
- Phage-induced lysis recycles nutrients, influencing biogeochemical cycles.
- Understanding phage distribution and diversity is key to ecosystem function.
Purpose of the Study:
- To review current research on phage ecology, diversity, and biogeography.
- To examine spatial and temporal patterns in phage communities.
- To challenge the 'everything is everywhere' assumption in phage ecology.
Main Methods:
- Review of recent studies on phage biogeography.
- Analysis of experimental data on phage consortia over time.
- Integration of findings on phage diversity across scales.
Main Results:
- Phage communities exhibit significant spatial variation; some are globally distributed, others endemic.
- Temporal studies reveal recurring patterns in phage consortia.
- The homogeneity assumption for phage distribution is being revised.
Conclusions:
- Phage biogeography is complex, with both widespread and unique phage populations.
- Temporal dynamics show predictable patterns in phage community structure.
- Characterizing phage diversity and distribution is essential for understanding microbial ecosystems.
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