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Updated: Jun 19, 2026

Genotyping of Staphylococcus aureus by Ribosomal Spacer PCR (RS-PCR)
Published on: November 4, 2016
Spa type distribution in Staphylococcus aureus originating from pigs, cattle and poultry
H Hasman1, A Moodley, L Guardabassi
1Technical University of Denmark, National Food Institute, Bülowsvej 27, 1790 Copenhagen V, Denmark. hhas@food.dtu.dk
Abstract:
Methicillin-resistant S. aureus (MRSA) of clonal complex 398 (CC398) is emerging globally among production animals such as cattle, pigs and poultry as well as among humans. However, little is known about the prevalence of CC398 among methicillin sensitive S. aureus (MSSA) or the relative clonal distribution of S. aureus isolated from these three animal reservoirs. To study this, we have analyzed a random sample of S. aureus consisting of 296 epidemiologically unrelated isolates from infections and colonisation of pigs, cattle and poultry. These were examined and compared by spa and multi-locus sequence typing (MLST) and the result was compared to the most common spa types found among human blood isolates. Little overlap in spa types was seen between isolates from the three animal reservoirs or between animals and humans. Most of the porcine isolates had the spa types t034 (CC398), t1333 (CC30) and t337 (CC9), while the bovine isolates mainly had spa types t518 (CC50), t524 (CC97) and t529 (CC151). None of these spa types are common among human blood isolates in Denmark. Surprisingly, almost all of the poultry isolates (96%) belonged to CC5 (spa types t002 and t306), which is also known to be commonly found among human blood isolates and subsequent pulsed-field gel electrophoresis (PFGE) analysis identified indistinguishable PFGE patterns among a poultry isolate and selected human isolates. In conclusion, strains of MSSA CC398 were commonly present in pigs but not present at all in the other reservoirs tested.
Insights
Methicillin-sensitive Staphylococcus aureus (MSSA) clonal complex 398 (CC398) is common in pigs but absent in cattle and poultry. Poultry isolates predominantly belonged to CC5, a common human type, with similar genetic profiles found in human infections.
Area of Science:
- Veterinary Microbiology
- Bacterial Genomics
- Public Health
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) CC398 is a growing global concern in livestock and humans.
- Limited data exists on the prevalence and clonal distribution of methicillin-sensitive Staphylococcus aureus (MSSA) in animal reservoirs.
Purpose of the Study:
- To investigate the prevalence of S. aureus clonal complexes, including CC398, in pigs, cattle, and poultry.
- To compare the clonal distribution of S. aureus from these animal reservoirs with human isolates.
Main Methods:
- Analysis of 296 S. aureus isolates from pigs, cattle, and poultry using spa typing and multi-locus sequence typing (MLST).
- Comparison of animal isolate spa types with common spa types from Danish human blood isolates.
- Pulsed-field gel electrophoresis (PFGE) for genetic comparison of selected poultry and human isolates.
Main Results:
- Significant differences in spa types were observed among S. aureus isolates from pigs, cattle, and poultry, with little overlap between reservoirs or with human isolates.
- Porcine isolates were dominated by CC398 (spa type t034), CC30, and CC9.
- Bovine isolates were mainly CC50, CC97, and CC151.
- Poultry isolates were predominantly CC5 (spa types t002, t306), a common human type, with PFGE confirming genetic similarity between a poultry isolate and human isolates.
- MSSA CC398 was prevalent in pigs but not detected in cattle or poultry.
Conclusions:
- S. aureus clonal distribution varies significantly across different animal reservoirs (pigs, cattle, poultry).
- Poultry harbors S. aureus CC5, a type frequently found in humans, suggesting potential transmission pathways.
- MSSA CC398 is a significant component of the pig S. aureus population but not found in the other tested animal reservoirs.
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