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Examining Proteasome Assembly with Recombinant Archaeal Proteasomes and Nondenaturing PAGE: The Case for a Combined Approach
Published on: December 17, 2016
Structural insights on the Mycobacterium tuberculosis proteasomal ATPase Mpa
1Biology Department, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Abstract:
Proteasome-mediated protein turnover in all domains of life is an energy-dependent process that requires ATPase activity. Mycobacterium tuberculosis (Mtb) was recently shown to possess a ubiquitin-like proteasome pathway that plays an essential role in Mtb resistance to killing by products of host macrophages. Here we report our structural and biochemical investigation of Mpa, the presumptive Mtb proteasomal ATPase. We demonstrate that Mpa binds to the Mtb proteasome in the presence of ATPgammaS, providing the physical evidence that Mpa is the proteasomal ATPase. X-ray crystallographic determination of the conserved interdomain showed a five stranded double beta barrel structure containing a Greek key motif. Structure and mutational analysis indicate a major role of the interdomain for Mpa hexamerization. Our mutational and functional studies further suggest that the central channel in the Mpa hexamer is involved in protein substrate translocation and degradation. These studies provide insights into how a bacterial proteasomal ATPase interacts with and facilitates protein degradation by the proteasome.
Insights
Mycobacterium tuberculosis proteasomal ATPase (Mpa) fuels essential protein degradation. Structural and functional studies reveal Mpa hexamerization and substrate translocation mechanisms, crucial for bacterial survival.
Area of Science:
- Biochemistry
- Structural Biology
- Microbiology
Background:
- Proteasome-mediated protein turnover is vital and ATP-dependent across life.
- Mycobacterium tuberculosis (Mtb) utilizes a ubiquitin-like proteasome pathway for resistance against host macrophages.
Purpose of the Study:
- To structurally and biochemically characterize Mpa, the Mtb proteasomal ATPase.
- To elucidate the mechanism of Mpa interaction with the Mtb proteasome and its role in protein degradation.
Main Methods:
- X-ray crystallography was used to determine the structure of the Mpa interdomain.
- Biochemical assays and mutational analyses were performed to assess Mpa function and hexamerization.
Main Results:
- Mpa binds to the Mtb proteasome in an ATP-dependent manner, confirming its role as the proteasomal ATPase.
- The crystal structure revealed a conserved interdomain with a Greek key motif essential for Mpa hexamerization.
- Mutational studies suggest the Mpa hexamer's central channel facilitates protein substrate translocation and degradation.
Conclusions:
- Mpa is the functional proteasomal ATPase in Mtb, essential for its survival.
- The structure-function analysis provides mechanistic insights into Mpa's role in substrate processing and proteasomal degradation.
- Understanding Mpa's function offers potential avenues for targeting Mtb.
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