Systematically linking drug susceptibility to cancer genome aberrations
Related Experiment Video
Updated: Jun 19, 2026

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
1Max Planck Institute for Neurological Research with Klaus-Joachim-Zülch Laboratories of the Max Planck Society and the Medical Faculty of the University of Köln, Köln, Germany.
Abstract:
Genetic aberrations (lesions) govern the transformation of previously normal cells into cancer cells by changing key signaling pathways within the cells that control cellular proliferation, differentiation and survival. Such lesions are thus considered prime molecular targets for cancer therapy. While some notable examples underscore the clinical relevance of this connection between genetics and drug response, there is a lack of analytical approaches to provide such novel "drug-mutation" combinations in a broad and unbiased fashion. We have therefore collected a panel of genetically and phenotypically characterized nonsmall cell lung cancer (NSCLC) cell lines to systematically screen for drug susceptibility of NSCLC as a function of genetic lesions. We found such genetic lesions to predict activity of geldanamycin-derived Hsp90 inhibitors as well as of the clinically approved SRC/ABL-inhibitor dasatinib. This work may therefore help advancing our understanding of critical oncogenic pathway dependencies and may impact future drug development by defining drug-susceptible patient populations.
Insights
Genetic aberrations in non-small cell lung cancer (NSCLC) predict responses to targeted therapies. This study identifies specific genetic lesions that make NSCLC cells susceptible to Hsp90 inhibitors and dasatinib.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Genetic aberrations drive cancer by altering cell signaling pathways.
- Identifying drug-mutation relationships is crucial for targeted cancer therapy.
- A systematic approach is needed to discover novel drug-mutation combinations.
Purpose of the Study:
- To systematically screen non-small cell lung cancer (NSCLC) cell lines for drug susceptibility based on genetic lesions.
- To identify novel drug-mutation combinations for NSCLC treatment.
- To understand oncogenic pathway dependencies in NSCLC.
Main Methods:
- Collected and characterized a panel of NSCLC cell lines with known genetic and phenotypic profiles.
- Performed systematic screening to assess drug susceptibility correlated with specific genetic alterations.
- Utilized geldanamycin-derived Hsp90 inhibitors and dasatinib (a SRC/ABL-inhibitor).
Main Results:
- Identified specific genetic lesions that predict sensitivity to Hsp90 inhibitors.
- Found that genetic lesions can predict response to the SRC/ABL-inhibitor dasatinib.
- Demonstrated a correlation between genetic aberrations and drug activity in NSCLC.
Conclusions:
- Genetic lesions in NSCLC can serve as biomarkers for predicting drug response.
- This research advances the understanding of oncogenic pathway dependencies.
- The findings can guide future drug development and define patient populations for targeted therapies.
Related Concept Videos
Treatment Resistant Cancers
Combination Therapies and Personalized Medicine
The combination of the drug acetazolamide and sulforaphane is a good example of combination therapy to treat cancer. The cells in the interior of a large tumor often die due to the hypoxic and...
Mutagenicity and Carcinogenicity
Cancer
Cancer-Critical Genes II: Tumor Suppressor Genes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...
Cancer-Critical Genes II: Tumor Suppressor Genes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...

