Multiple sclerosis susceptibility alleles in African Americans
B A Johnson1, J Wang, E M Taylor
1Department of Neurology, University of California, San Francisco, CA 94143, USA.
Genes and Immunity
|October 30, 2009
Summary
Genetic factors influence multiple sclerosis (MS) risk and progression differently across ancestries. This study identified specific genetic variants associated with MS risk in African Americans, confirming shared genetic mechanisms with European populations.
Area of Science:
- Neuroimmunology
- Genetics of Autoimmune Diseases
- Population Health
Background:
- Multiple sclerosis (MS) presents with complex genetic underpinnings and gene-environment interactions.
- African Americans exhibit lower MS incidence but higher disability risk compared to White populations, suggesting potential genetic and environmental disparities.
- Previous studies identified single nucleotide polymorphisms (SNPs) associated with MS risk in White populations.
Purpose of the Study:
- To investigate the association of previously identified MS risk-associated SNPs with MS susceptibility in African Americans.
- To explore potential genetic influences on MS disease characteristics, such as age of onset and progression, in African Americans.
Main Methods:
- A replication study was conducted using 918 MS cases and 656 unrelated controls from an African American cohort.
- Genotyping was performed for SNPs in 12 candidate genes previously implicated in MS risk.
- Statistical analyses were used to assess associations between SNPs and MS risk, age of onset, and disease progression.
Main Results:
- SNPs in CD6, CLEC16a, EVI5, GPC5, and TYK2 were significantly associated with MS risk in the African American cohort.
- The strongest association outside the major histocompatibility complex was observed for EVI5 (rs10735781, OR=1.233, P=0.006).
- RGS1 showed a potential association with age of onset, and TNFRSF1A with disease progression.
- No statistically significant inconsistencies were found between the observed effects in African Americans and those previously established in White populations.
Conclusions:
- The findings support shared genetic mechanisms underlying MS susceptibility across individuals of European and African ancestry.
- Specific genes, including EVI5, contribute to MS risk in African Americans.
- Genetic factors may influence MS disease heterogeneity, including age of onset and progression, across different ancestral groups.
Related Concept Videos
Multiple Sclerosis l: Introduction
Multiple sclerosis is a chronic autoimmune disease of the central nervous system (CNS) that affects the brain, spinal cord, and optic nerves. It is an inflammatory demyelinating disorder and a leading cause of neurological disability in young adults.EpidemiologyMS commonly begins between 20 and 40 years of age and is twice as common in women. Its exact cause remains unclear, but genetic susceptibility contributes, with higher risk in first-degree relatives and identical twins. A greater...
Principles of Pharmacogenetics: Types of Genetic Variants
The human genome is over 99.9% identical between individuals, yet genetic differences exist at millions of bases. The human genome contains approximately 3 million variant positions per individual, many of which are heterozygous, contributing to genetic diversity and individual traits. Genetic variations include single-nucleotide polymorphisms (SNPs), insertions, deletions, and copy number variations (CNVs).SNPs, the most common variation, involve single-base changes in DNA. These can be...
Genome-wide Association Studies-GWAS
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Genetic variations significantly influence drug response through pharmacokinetics, receptor interactions, and biologic milieu modifications. Pharmacokinetic alterations impact drug metabolism and clearance, affecting efficacy and toxicity. Variants in drug-metabolizing enzymes, such as CYP2C9 and CYP2C19, alter drug activation and elimination. For example, CYP2C9 loss-of-function variants require lower warfarin doses to prevent excessive bleeding, while CYP2C19 variants reduce clopidogrel...
Single Nucleotide Polymorphisms-SNPs
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
Multiple Allele Traits
The Concept of Multiple Allelism

